BS20186.complete Sequence
707 bp assembled on 2011-01-07
GenBank Submission: KX800953
> BS20186.complete
GAAGTTATCAGTCGACATGTCCCTAGAAATCCTGAAACAAGGCGCTGAAG
GACGCCTATATTTGGGCGATTTCAAAGGAGAAGCCTGCCTGATCAAGGAG
CGGTTCGTAAAGAAGTACCGCCACCCGGAACTGAACACCCAGATCACGCG
GCAGCGCATGAAAGCGGAGGCCAAGGCATCGGGAAGATGTCTAGCCGCTG
GAATCCTGGCACCAAAGATCCTCCACTCGGACCTCAACACCCACAAGCTG
TATATGGAATATTTCGATGCAGCCAAGACTGCCAAGCAGTTCATCCAGGA
AACAGTGTCCACTCAGACGGAGGATGAAGCCAAGAAATGTCTGCTGGAGT
TCTGCACGCGGATCGGTGAAATCATTGGGAAAATGCACTCCAATCACATT
ATACATGGCGATCTCACCACATCTAACATCCTCATCAATCCGAAGGGTGG
CGACTACGATGTCATTCTGATTGACTTCGGCTTGAGCCACTACAATCAGG
CCACCGAGGACAAGGGTGTGGATCTGTACGTCCTGGAGCGGGCGCTACTC
AGTACGCACAGCGAACAGCCGTATATCTTCGAGCACGTCCTGGCCGCCTA
TCGCACAGCGTGCGGTAAGGACGAACAGGCAGTGCTCACCAAGTTCGAGG
AGGTGCGAGCACGCGGACGCAAAAGAACCATGATTGGTTAAAAGCTTTCT
AGACCAT
BS20186.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-RA | 675 | CG10673-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-RA | 744 | CG10673-RA | 42..716 | 17..691 | 3375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5138680..5139354 | 691..17 | 3375 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:49:18 has no hits.
BS20186.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:52 Download gff for
BS20186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10673-RA | 42..714 | 17..689 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:06 Download gff for
BS20186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prpk-RA | 42..714 | 17..689 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:52 Download gff for
BS20186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prpk-RA | 42..714 | 17..689 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:52 Download gff for
BS20186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5138682..5139354 | 17..689 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:06 Download gff for
BS20186.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5131782..5132454 | 17..689 | 100 | | Minus |
BS20186.pep Sequence
Translation from 16 to 690
> BS20186.pep
MSLEILKQGAEGRLYLGDFKGEACLIKERFVKKYRHPELNTQITRQRMKA
EAKASGRCLAAGILAPKILHSDLNTHKLYMEYFDAAKTAKQFIQETVSTQ
TEDEAKKCLLEFCTRIGEIIGKMHSNHIIHGDLTTSNILINPKGGDYDVI
LIDFGLSHYNQATEDKGVDLYVLERALLSTHSEQPYIFEHVLAAYRTACG
KDEQAVLTKFEEVRARGRKRTMIG*
BS20186.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-PA | 224 | CG10673-PA | 1..224 | 1..224 | 1158 | 100 | Plus |