Clone BS20186 Report

Search the DGRC for BS20186

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptPrpk-RA
Protein status:BS20186.pep: full length peptide match
Sequenced Size:707

Clone Sequence Records

BS20186.complete Sequence

707 bp assembled on 2011-01-07

GenBank Submission: KX800953

> BS20186.complete
GAAGTTATCAGTCGACATGTCCCTAGAAATCCTGAAACAAGGCGCTGAAG
GACGCCTATATTTGGGCGATTTCAAAGGAGAAGCCTGCCTGATCAAGGAG
CGGTTCGTAAAGAAGTACCGCCACCCGGAACTGAACACCCAGATCACGCG
GCAGCGCATGAAAGCGGAGGCCAAGGCATCGGGAAGATGTCTAGCCGCTG
GAATCCTGGCACCAAAGATCCTCCACTCGGACCTCAACACCCACAAGCTG
TATATGGAATATTTCGATGCAGCCAAGACTGCCAAGCAGTTCATCCAGGA
AACAGTGTCCACTCAGACGGAGGATGAAGCCAAGAAATGTCTGCTGGAGT
TCTGCACGCGGATCGGTGAAATCATTGGGAAAATGCACTCCAATCACATT
ATACATGGCGATCTCACCACATCTAACATCCTCATCAATCCGAAGGGTGG
CGACTACGATGTCATTCTGATTGACTTCGGCTTGAGCCACTACAATCAGG
CCACCGAGGACAAGGGTGTGGATCTGTACGTCCTGGAGCGGGCGCTACTC
AGTACGCACAGCGAACAGCCGTATATCTTCGAGCACGTCCTGGCCGCCTA
TCGCACAGCGTGCGGTAAGGACGAACAGGCAGTGCTCACCAAGTTCGAGG
AGGTGCGAGCACGCGGACGCAAAAGAACCATGATTGGTTAAAAGCTTTCT
AGACCAT

BS20186.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:19
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-RA 675 CG10673-PA 1..675 17..691 3375 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:20
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-RA 744 CG10673-RA 42..716 17..691 3375 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:17
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5138680..5139354 691..17 3375 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:49:18 has no hits.

BS20186.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:52 Download gff for BS20186.complete
Subject Subject Range Query Range Percent Splice Strand
CG10673-RA 42..714 17..689 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:06 Download gff for BS20186.complete
Subject Subject Range Query Range Percent Splice Strand
Prpk-RA 42..714 17..689 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:52 Download gff for BS20186.complete
Subject Subject Range Query Range Percent Splice Strand
Prpk-RA 42..714 17..689 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:52 Download gff for BS20186.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5138682..5139354 17..689 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:06 Download gff for BS20186.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5131782..5132454 17..689 100   Minus

BS20186.pep Sequence

Translation from 16 to 690

> BS20186.pep
MSLEILKQGAEGRLYLGDFKGEACLIKERFVKKYRHPELNTQITRQRMKA
EAKASGRCLAAGILAPKILHSDLNTHKLYMEYFDAAKTAKQFIQETVSTQ
TEDEAKKCLLEFCTRIGEIIGKMHSNHIIHGDLTTSNILINPKGGDYDVI
LIDFGLSHYNQATEDKGVDLYVLERALLSTHSEQPYIFEHVLAAYRTACG
KDEQAVLTKFEEVRARGRKRTMIG*

BS20186.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:01
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-PA 224 CG10673-PA 1..224 1..224 1158 100 Plus