BS20187.complete Sequence
497 bp assembled on 2011-01-07
GenBank Submission: KX805074
> BS20187.complete
GAAGTTATCAGTCGACATGTCGTCCTACATTTCGCGTCTACTTAAGGCTC
AGTCCGCCTCCAAACGTCTGATCTCCAATTTAACCCAGCGCGACGGAAAG
CTAAGCTCTTTGCTTCGACGACTAGGTTTACAGTGGCAAGGATCAGCCGC
TGCTCCTCAACAGCGTCCCATATCCACAACTCAGGTGCAAAAGTCAGCGC
TAATTGCGGACGATCAACTGGTCACCGGGATTCAGAAGCGCGAAATGCTG
CTGGCCAAGCAGGGCTGCGAGGACCCTTGGGGTTTCAGCAAGGTGATCAG
GCGCGGATCGGGAAGGGAGAACGACCCCACCGTCGTGCCATCGGCGTTCG
ATGCACGCCTCGTAGGCTGTCTGTGCCTGGATGACCGCTTGCCCAAGTGG
ATGTGGATTGAGAAGGACGAGGGACCGAAGCGGTGCGAGTGCGGCCACTA
CTTCATCCTCAAGAATGTCCCACCCGTTTAGAAGCTTTCTAGACCAT
BS20187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-RA | 465 | CG11043-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-RA | 647 | CG11043-RA | 101..566 | 17..482 | 2330 | 100 | Plus |
| CG9596-RC | 2175 | CG9596-RC | 1549..1835 | 482..196 | 1435 | 100 | Minus |
| CG9596-RC | 2175 | CG9596-RC | 1890..2070 | 197..17 | 905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6559766..6560052 | 196..482 | 1435 | 100 | Plus |
| 2L | 23513712 | 2L | 6559531..6559711 | 17..197 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:49:23 has no hits.
BS20187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:53 Download gff for
BS20187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..565 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:07 Download gff for
BS20187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..565 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:54 Download gff for
BS20187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..565 | 17..481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:54 Download gff for
BS20187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6559768..6560051 | 198..481 | 100 | | Plus |
| 2L | 6559531..6559711 | 17..197 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:07 Download gff for
BS20187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6559531..6559711 | 17..197 | 100 | -> | Plus |
| arm_2L | 6559768..6560051 | 198..481 | 100 | | Plus |
BS20187.pep Sequence
Translation from 16 to 480
> BS20187.pep
MSSYISRLLKAQSASKRLISNLTQRDGKLSSLLRRLGLQWQGSAAAPQQR
PISTTQVQKSALIADDQLVTGIQKREMLLAKQGCEDPWGFSKVIRRGSGR
ENDPTVVPSAFDARLVGCLCLDDRLPKWMWIEKDEGPKRCECGHYFILKN
VPPV*
BS20187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-PA | 154 | CG11043-PA | 1..154 | 1..154 | 807 | 100 | Plus |
| CoVb-PB | 120 | CG11015-PB | 1..114 | 29..148 | 223 | 41.8 | Plus |
| CoVb-PA | 120 | CG11015-PA | 1..114 | 29..148 | 223 | 41.8 | Plus |
