Clone BS20191 Report

Search the DGRC for BS20191

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:201
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG12343-RA
Protein status:BS20191.pep: full length peptide match
Sequenced Size:713

Clone Sequence Records

BS20191.complete Sequence

713 bp assembled on 2011-01-07

GenBank Submission: KX803423

> BS20191.complete
GAAGTTATCAGTCGACATGGAAAAGACGAAAACGGCTGCCGAAAAATTGG
CGGAGCGCAAGGCGCGTTTGCTGGACCTACACAAGAAGCGCCAGGAGGCG
CGTACGGACAACCACCAGGAAGTGGTGGCAGAGGACGCTCGCAAGAAGCT
CCCCAAGAACTGGGAGGCTCGCAAGCGACAGGCGGAATGGATACTAGCGG
ACGACAAGGCGCGAGCCGAGGCGCAGGCAGCTGGCAAGGATTACGAGCGT
TTGAAGCTTTTGGAGGTATCCGCTGTGGATGCGGATCGCATTGAGAAAAA
GAAGAAGCGTAAAGACAATCCAGATCTTGGTTTCTCCACATACGAAGCTC
AAACAGCTAGACAGTACAACCGATTGGTCAAGAGTATGCCTGCTCGCGAT
TTGGAAAAGTACGAGCGCCAGAAGGAGGAACTCGGTGACGCCTTCTACGG
TGGAGCACACACCACTTTGCATTCGAGGACGAAGGACACTCCAGGTGCTA
TTAACAAAATGGTAACAGACCTGGAGCAGCAGATAGAGCGCCGCAAGAAG
TACTCTCGCAGGAGGATCTACAACGACGATGCGGATGTGGACTTCATCAA
CGAGAGGAATTCCAAGTTCAACAAAAAGCTGGACCGCTTCTACAGCGAGC
ATACAGCCGAGATCAAACAAAATTTGGAGCGGGGAACAGCTATTTAAAAG
CTTTCTAGACCAT

BS20191.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-RA 681 CG12343-PA 1..681 17..697 3405 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-RA 973 CG12343-RA 110..790 17..697 3405 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:47
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10822583..10823263 697..17 3405 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:49:48 has no hits.

BS20191.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:55 Download gff for BS20191.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 59..737 17..695 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:11 Download gff for BS20191.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 110..788 17..695 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:01 Download gff for BS20191.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 110..788 17..695 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:01 Download gff for BS20191.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10822585..10823263 17..695 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:11 Download gff for BS20191.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6710090..6710768 17..695 100   Minus

BS20191.pep Sequence

Translation from 16 to 696

> BS20191.pep
MEKTKTAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWE
ARKRQAEWILADDKARAEAQAAGKDYERLKLLEVSAVDADRIEKKKKRKD
NPDLGFSTYEAQTARQYNRLVKSMPARDLEKYERQKEELGDAFYGGAHTT
LHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVDFINERNSK
FNKKLDRFYSEHTAEIKQNLERGTAI*

BS20191.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-PA 226 CG12343-PA 1..226 1..226 1157 100 Plus