BS20195.complete Sequence
605 bp assembled on 2011-01-07
GenBank Submission: KX806135
> BS20195.complete
GAAGTTATCAGTCGACATGCTGGTCATGGACGCATTGTTTAACAGCCTAT
TGGTGGTCAGTTCCGGCTATGCGATCTACACTCTCCATCCAATGGAAACA
CCCTATGGCTATGCAACAGCGGCCTTGAGCCTGGTCCATGGAATTTTGGG
AATGGTGCGAGCGGCGAGCAACGACGATGACGAATGCAATCGGGTGCGAT
TGATTACGTCGGGCATCATGGAGATAGTACCGCTGCCCCTGACCAATATG
GAGCTCTATCTGAAGTCCACCAATCCGGGCTTGGCTTTGGCGCACACATG
TTTTGTGGTGCCATTAGTCTACGATATGTTGGCCAAAGTGGTTGACACCG
AGGATACCGTAACGGAGACCCTTAAGGAACTAACACTGTTGGGCAACGTT
GTGTCCATGCTCTTTTTGGGCGTCAACGAGTCGAATAATATGTACGGCAT
CTTGGCTGCCATCGCTTTTGGTGCTCGATACGGTTCCGCTTTTCTCGACT
ACTACTGGAAGGGATTAGGTGCCGAATTCACCCTACTGGCCCACTCCATG
TTTGTCCTACTGATGACGATGACCCTTTCGGCGAAATGAAAGCTTTCTAG
ACCAT
BS20195.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14269-RB | 573 | CG14269-PB | 1..573 | 17..589 | 2850 | 99.8 | Plus |
| CG14269-RA | 573 | CG14269-PA | 1..573 | 17..589 | 2850 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14269-RB | 815 | CG14269-RB | 98..671 | 17..590 | 2855 | 99.8 | Plus |
| CG14269-RA | 835 | CG14269-RA | 148..721 | 17..590 | 2855 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3435087..3435660 | 590..17 | 2855 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:58 has no hits.
BS20195.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:50 Download gff for
BS20195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14269-RA | 148..719 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:01 Download gff for
BS20195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14269-RA | 148..719 | 17..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:44 Download gff for
BS20195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14269-RA | 148..719 | 17..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:44 Download gff for
BS20195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3435089..3435660 | 17..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:01 Download gff for
BS20195.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3329122..3329693 | 17..588 | 99 | | Minus |
BS20195.pep Sequence
Translation from 16 to 588
> BS20195.pep
MLVMDALFNSLLVVSSGYAIYTLHPMETPYGYATAALSLVHGILGMVRAA
SNDDDECNRVRLITSGIMEIVPLPLTNMELYLKSTNPGLALAHTCFVVPL
VYDMLAKVVDTEDTVTETLKELTLLGNVVSMLFLGVNESNNMYGILAAIA
FGARYGSAFLDYYWKGLGAEFTLLAHSMFVLLMTMTLSAK*
BS20195.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14269-PB | 190 | CG14269-PB | 1..190 | 1..190 | 960 | 100 | Plus |
| CG14269-PA | 190 | CG14269-PA | 1..190 | 1..190 | 960 | 100 | Plus |
| CG12679-PA | 190 | CG12679-PA | 1..188 | 1..188 | 395 | 42.6 | Plus |
| CG16782-PA | 200 | CG16782-PA | 7..199 | 4..190 | 290 | 32.5 | Plus |
| CG14537-PA | 203 | CG14537-PA | 13..194 | 7..183 | 238 | 32.6 | Plus |
