BS20196.complete Sequence
685 bp assembled on 2011-01-07
GenBank Submission: KX800472
> BS20196.complete
GAAGTTATCAGTCGACATGAGGGTCTACTTGTATCAAATGCGCCCGGTGC
TCTTTCTCTTCTACATGGTGGAGACGACGGCCAACTTATTCGTTTTGTAC
TACCAACTGAAAGCATTTGTTTTCGTCAATCTGACAACGATGAAATGGGA
AGATGTTCTAATCCAAAGCTTTTATATGTCCTTCTTTTACATATTCACAG
TGGTAACGCTCTTTGCCAGCATAAATCTCTGCACCGGTCATCGCACATCG
ATCGTTGAGGAAGTTGTGCGTCCTCTGATCGGATTTGTTCTATATACGGT
AATATCGTTGATGGCACTGGGCGATGCCGAGACGGATTTCTATATATGGT
ATGATGGAAGGAACCCGGATGATTTACTATATCCGGAGAAGCCGCTCCAT
CCGTTCTTCGGTAGCCTGCGGGACCAGGCGACAGCCTCATTGGTGTCCAG
TGTTATCTATCTGCTGCACTGCCTCATTGCGTTGGATGTCCTTCTGTCGA
ATGACGATTCGGATAACGAACGCGAGTCATCCAATTCCTCCGACGATGTG
AACGAAGAGGTCGACTACGTTCCAGTGCGTCTGTACGTCTTTGGCGGCGT
GATGCAACGCTGGCTGGAGCAGTTCGACTGGTTTCAGGACTTTACCCACA
GTGGAGTCACAGATATCTGAAGCTTTCTAGACCAT
BS20196.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:49:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14315-RA | 654 | CG14315-PA | 1..654 | 17..670 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:49:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14315-RA | 771 | CG14315-RA | 70..723 | 17..670 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:49:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18158770..18159423 | 17..670 | 3270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:49:08 has no hits.
BS20196.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:51 Download gff for
BS20196.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14315-RA | 70..722 | 17..669 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:02 Download gff for
BS20196.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14315-RA | 70..722 | 17..669 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:48 Download gff for
BS20196.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14315-RA | 70..722 | 17..669 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:48 Download gff for
BS20196.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18158770..18159422 | 17..669 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:02 Download gff for
BS20196.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13984492..13985144 | 17..669 | 100 | | Plus |
BS20196.pep Sequence
Translation from 16 to 669
> BS20196.pep
MRVYLYQMRPVLFLFYMVETTANLFVLYYQLKAFVFVNLTTMKWEDVLIQ
SFYMSFFYIFTVVTLFASINLCTGHRTSIVEEVVRPLIGFVLYTVISLMA
LGDAETDFYIWYDGRNPDDLLYPEKPLHPFFGSLRDQATASLVSSVIYLL
HCLIALDVLLSNDDSDNERESSNSSDDVNEEVDYVPVRLYVFGGVMQRWL
EQFDWFQDFTHSGVTDI*
BS20196.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:57:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14315-PA | 217 | CG14315-PA | 1..217 | 1..217 | 1137 | 100 | Plus |
CG34433-PA | 233 | CG34433-PA | 31..230 | 8..214 | 377 | 34.6 | Plus |
CG34433-PB | 212 | CG34433-PB | 31..209 | 8..214 | 295 | 29.4 | Plus |
CG34432-PA | 213 | CG34432-PA | 20..213 | 8..217 | 220 | 24.9 | Plus |