BS20201.complete Sequence
563 bp assembled on 2011-01-07
GenBank Submission: KX804846
> BS20201.complete
GAAGTTATCAGTCGACATGTCGTCGAACAGCTCGGAGTCCCTAAACAAGA
TGAAGTCTCTTGTGGGGAAGATGATCTTCATGCAAGTCACCGAACATCTT
TTCCTAAGGGCGCAGCAGTTGCTGGATTCTGATGTCAGCATAGAAGAACG
TGTGCGCAGAATGGAGGTCCTTAACAACAACATGAAGTGGTTCAATTCCG
AGCGTACACGCATCCTAGAGCAGTTGCAGCTGAATATATTCGGTCAGATT
TCGGTGGAGCATCATAATGCGATGAATATGAGTGAGAATCTGTATGAGCT
GCGCGAGGGACTAGACGGACTCAGCCGTAGGATGGAAAGTATGCAAGAGG
ACATTACCTGTTCGATTTGCCTCTCACCCTGGTCTTCCAATGGCAGACAT
CGAGTGGTCTCTCTCCGATGTGGACACCTATTCGGGAATAGCTGCATCAG
AACTGCCATCCGCAGATCACATCGGTGCCCGATATGCAGGCGTAGGGCTC
TACACGCTGATGTGCGCAGGATATTCAGTCGACGAATAAGTCATTAAAAG
CTTTCTAGACCAT
BS20201.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13481-RC | 531 | CG13481-PC | 1..531 | 17..547 | 2655 | 100 | Plus |
| CG13481-RB | 531 | CG13481-PB | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13481-RC | 783 | CG13481-RC | 65..595 | 17..547 | 2655 | 100 | Plus |
| CG13481-RB | 714 | CG13481-RB | 65..595 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14369113..14369643 | 547..17 | 2655 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:50:15 has no hits.
BS20201.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:31:59 Download gff for
BS20201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 65..593 | 17..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:18 Download gff for
BS20201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 65..593 | 17..545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:10 Download gff for
BS20201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13481-RB | 65..593 | 17..545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:10 Download gff for
BS20201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14369115..14369643 | 17..545 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:18 Download gff for
BS20201.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14362215..14362743 | 17..545 | 100 | | Minus |
BS20201.pep Sequence
Translation from 16 to 546
> BS20201.pep
MSSNSSESLNKMKSLVGKMIFMQVTEHLFLRAQQLLDSDVSIEERVRRME
VLNNNMKWFNSERTRILEQLQLNIFGQISVEHHNAMNMSENLYELREGLD
GLSRRMESMQEDITCSICLSPWSSNGRHRVVSLRCGHLFGNSCIRTAIRR
SHRCPICRRRALHADVRRIFSRRISH*
BS20201.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13481-PC | 176 | CG13481-PC | 1..176 | 1..176 | 910 | 100 | Plus |
| CG13481-PB | 176 | CG13481-PB | 1..176 | 1..176 | 910 | 100 | Plus |
| CG17329-PA | 162 | CG17329-PA | 22..156 | 38..171 | 333 | 49.6 | Plus |
| CG31807-PB | 142 | CG31807-PB | 8..137 | 33..169 | 231 | 37.2 | Plus |
| CG31807-PA | 155 | CG31807-PA | 21..150 | 33..169 | 231 | 37.2 | Plus |
