BS20227.complete Sequence
395 bp assembled on 2011-01-07
GenBank Submission: KX801326
> BS20227.complete
GAAGTTATCAGTCGACATGCGCGTACCCGGAGCCCTGTTTGCCGCGCGCG
GCCGAGCGCCTCAAAGCGAGAAGGACGTGCCCTTCCAGGAGATTCTGCCT
CTGCGGCTGAAGAACACCGTGAGCGGGAAGGCGGACTCCGGATCCGATGT
GGCCTGTCTCCAGGAGATGGGCGTGCTGTTCGCCTGCTTGAAAGACAACG
AATTCGTGGAGAAGTACTGCCACAAGGAGATCAGCCAGTTCCAGAACTGC
TACAAGTGCTACATGGACCGTAAGTTTGAGGCGAAGAAGACCGTGAACCA
GGGAATCGTCCAACCGGGCAGCAACCTGAACTACAAGCAACTTAACAAGT
ACATGCGCCGCTACCCCAATCCCGTATAGAAGCTTTCTAGACCAT
BS20227.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12848-RB | 363 | CG12848-PB | 1..363 | 17..379 | 1815 | 100 | Plus |
CG12848-RA | 363 | CG12848-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12848-RA | 469 | CG12848-RA | 59..425 | 13..379 | 1820 | 99.7 | Plus |
CG12848-RB | 478 | CG12848-RB | 72..434 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24762610..24762972 | 379..17 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:50:24 has no hits.
BS20227.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:01 Download gff for
BS20227.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12848-RA | 51..413 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:23 Download gff for
BS20227.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12848-RA | 63..425 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:13 Download gff for
BS20227.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12848-RA | 63..425 | 17..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:13 Download gff for
BS20227.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24762610..24762972 | 17..379 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:23 Download gff for
BS20227.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20650133..20650495 | 17..379 | 100 | | Minus |
BS20227.pep Sequence
Translation from 16 to 378
> BS20227.pep
MRVPGALFAARGRAPQSEKDVPFQEILPLRLKNTVSGKADSGSDVACLQE
MGVLFACLKDNEFVEKYCHKEISQFQNCYKCYMDRKFEAKKTVNQGIVQP
GSNLNYKQLNKYMRRYPNPV*
BS20227.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12848-PB | 120 | CG12848-PB | 1..120 | 1..120 | 640 | 100 | Plus |
CG12848-PA | 120 | CG12848-PA | 1..120 | 1..120 | 640 | 100 | Plus |