BS20285.complete Sequence
839 bp assembled on 2011-01-07
GenBank Submission: KX803389
> BS20285.complete
GAAGTTATCAGTCGACATGCAAAAGTGCCGAGCTCCAATTCCGTTTCTTC
TCATAGCTGGGATCCTTGTGATCCTGGAAGCATCCCGCACAGAGGCTGCC
GTCCCTCGGCAGCCGGACAGTCGGATTGTGAACGGACGCGAAGCCACCGA
AGGCCAGTTTCCATACCAACTCTCGCTGCGCCGCCAAACGGTACACATCT
GCGGCGCCTCGATTCTCTCCAGCAACTGGGCCATTACGGCCGCTCATTGC
ATCGACGGGCATGAGCAGCAGCCGCGGGAATTCACACTCCGCCAGGGCAG
CATCATGCGTACCTCGGGCGGCACTGTTCAGCCGGTGAAAGCCATCTACA
AGCATCCGGCCTACGATCGGGCGGACATGAACTTCGACGTGGCCCTTCTA
CGAACAGCGGACGGAGCACTCAGCCTGCCGTTGGGCAAAGTGGCGCCCAT
TCGATTGCCCACCGTTGGCGAGGCCATCTCGGAAAGCATGCCCGCCGTCG
TCTCCGGCTGGGGACACATGAGCACCTCCAATCCCGTCCTGTCGTCGGTA
CTCAAAAGCACTACGGTACTGACAGTCAACCAAGAGAAGTGCCACAACGA
TCTACGCCATCACGGAGGCGTCACCGAAGCAATGTTCTGCGCGGCCGCCA
GAAACACAGACGCATGTCAAGGCGACAGTGGAGGTCCGATCAGCGCACAG
GGAACCCTTATCGGAATCGTATCCTGGGGAGTTGGCTGCGCGGATCCGTA
CTATCCAGGAGTTTACACCCGCCTGGCCCATCCTACTATACGCCGTTGGA
TACGCCTGCTCACAAAGTTGTAGAAGCTTTCTAGACCAT
BS20285.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10405-RB | 807 | CG10405-PB | 1..807 | 17..823 | 4035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10405-RB | 929 | CG10405-RB | 75..883 | 16..824 | 4045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16454566..16455180 | 16..630 | 3075 | 100 | Plus |
| 3R | 32079331 | 3R | 16455597..16455751 | 670..824 | 775 | 100 | Plus |
| 3R | 32079331 | 3R | 16455485..16455526 | 631..672 | 210 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:50:58 has no hits.
BS20285.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:06 Download gff for
BS20285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10405-RB | 24..830 | 17..823 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:28 Download gff for
BS20285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10405-RB | 76..882 | 17..823 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:21 Download gff for
BS20285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10405-RB | 76..882 | 17..823 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:21 Download gff for
BS20285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16454567..16455180 | 17..630 | 100 | -> | Plus |
| 3R | 16455485..16455525 | 631..671 | 100 | -> | Plus |
| 3R | 16455599..16455750 | 672..823 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:28 Download gff for
BS20285.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12280289..12280902 | 17..630 | 100 | -> | Plus |
| arm_3R | 12281207..12281247 | 631..671 | 100 | -> | Plus |
| arm_3R | 12281321..12281472 | 672..823 | 100 | | Plus |
BS20285.pep Sequence
Translation from 16 to 822
> BS20285.pep
MQKCRAPIPFLLIAGILVILEASRTEAAVPRQPDSRIVNGREATEGQFPY
QLSLRRQTVHICGASILSSNWAITAAHCIDGHEQQPREFTLRQGSIMRTS
GGTVQPVKAIYKHPAYDRADMNFDVALLRTADGALSLPLGKVAPIRLPTV
GEAISESMPAVVSGWGHMSTSNPVLSSVLKSTTVLTVNQEKCHNDLRHHG
GVTEAMFCAAARNTDACQGDSGGPISAQGTLIGIVSWGVGCADPYYPGVY
TRLAHPTIRRWIRLLTKL*
BS20285.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10405-PB | 268 | CG10405-PB | 1..268 | 1..268 | 1403 | 100 | Plus |
| Try29F-PD | 267 | CG9564-PD | 17..261 | 11..262 | 431 | 39.1 | Plus |
| Try29F-PC | 267 | CG9564-PC | 17..261 | 11..262 | 431 | 39.1 | Plus |
| alphaTry-PA | 256 | CG18444-PA | 6..249 | 11..262 | 404 | 38.3 | Plus |
| gammaTry-PA | 253 | CG30028-PA | 6..249 | 11..262 | 391 | 37.5 | Plus |
