BS20288.complete Sequence
755 bp assembled on 2011-01-07
GenBank Submission: KX802149
> BS20288.complete
GAAGTTATCAGTCGACATGATTTATGCGATCGTGATACACATACTGTCCC
TTCTGGTGGGCTGTTTCTATCCAGCATTCGCGTCCTACAAGATCCTGAAA
AGTCAGAATTGTAGCGTCAATGATCTTCGCGGATGGTTAATCTACTGGAT
TGCCTATGGAGTTTATGTGGCCTTTGATTATTTCACAGCGGGTCTGCTGG
CATTTATTCCATTGCTAAGTGAGTTCAAGGTGCTTCTCCTGTTCTGGATG
TTGCCCTCTGTGGGCGGCGGCAGTGAGGTGATCTACGAGGAGTTCCTGCG
ATCCTTTAGCTGTAACGAATCCTTCGACCAGGTCCTGGGACGTATCACCT
TGGAATGGGGCGAATTGGTGTGGCAACAAGTTTGCTCCGTTCTTAGCCAT
TTGATGGTTTTGGCAGATCGCTATCTCCTGCCCAGCGGTCATCGTCCTGC
CCTCCAAATAACGCCCAGCATCGAGGATCTGGTCAACGATGCCATAGCCA
AAAGGCAGTTGGAAGAGAAGCGGAAACAGATGGGTAACTTATCTGATACC
ATCAACGAGGTTTTGGGAGAAAATATCGATTTAAATATGGATCTGCTGCA
CGGATCCGAATCTGATTTATTGGTTATTAAGGAGCCTATTTCCAAGCCCA
AGGAGAGACCAATACCGCCGCCGAAGCCAATGCGTCAGCCATCATCAAGC
AACCAGCAAGAAATGAATCTTTCGTCGCAGTTTATGTGAAAGCTTTCTAG
ACCAT
BS20288.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11697-RA | 723 | CG11697-PA | 1..723 | 17..739 | 3615 | 100 | Plus |
| CG11697-RB | 669 | CG11697-PB | 260..669 | 330..739 | 2050 | 100 | Plus |
| CG11697-RB | 669 | CG11697-PB | 1..263 | 17..279 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:51:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11697-RA | 934 | CG11697-RA | 96..818 | 17..739 | 3615 | 100 | Plus |
| CG11697-RB | 880 | CG11697-RB | 355..764 | 330..739 | 2050 | 100 | Plus |
| CG11697-RB | 880 | CG11697-RB | 96..358 | 17..279 | 1315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11572802..11573524 | 17..739 | 3615 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:51:08 has no hits.
BS20288.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:07 Download gff for
BS20288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..817 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:29 Download gff for
BS20288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..817 | 17..738 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:24 Download gff for
BS20288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11697-RA | 96..817 | 17..738 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:24 Download gff for
BS20288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11572802..11573523 | 17..738 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:29 Download gff for
BS20288.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11466835..11467556 | 17..738 | 100 | | Plus |
BS20288.pep Sequence
Translation from 16 to 738
> BS20288.pep
MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVY
VAFDYFTAGLLAFIPLLSEFKVLLLFWMLPSVGGGSEVIYEEFLRSFSCN
ESFDQVLGRITLEWGELVWQQVCSVLSHLMVLADRYLLPSGHRPALQITP
SIEDLVNDAIAKRQLEEKRKQMGNLSDTINEVLGENIDLNMDLLHGSESD
LLVIKEPISKPKERPIPPPKPMRQPSSSNQQEMNLSSQFM*
BS20288.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11697-PA | 240 | CG11697-PA | 1..240 | 1..240 | 1246 | 100 | Plus |
| CG11697-PB | 222 | CG11697-PB | 1..222 | 1..240 | 1122 | 92.5 | Plus |
| CG42678-PG | 288 | CG30193-PG | 1..163 | 1..155 | 170 | 28.1 | Plus |
| CG42678-PE | 288 | CG30193-PE | 1..163 | 1..155 | 170 | 28.1 | Plus |
| CG42678-PS | 312 | CG42678-PS | 1..92 | 1..94 | 167 | 31.9 | Plus |
