BS20318.complete Sequence
989 bp assembled on 2011-01-07
GenBank Submission: KX805492
> BS20318.complete
GAAGTTATCAGTCGACATGGACCGAAAATGGCAGCTCCTGGGACTGGGTT
TCGTCCTGGGAGTGACTGCGCTCTGTGCATCCTTCGTGGGTGGAATGTAT
TTTCAGCACACAGATGCCAGAAAACGCCTGCGGGAACTAATACAAACGGA
TCCCTATGCCTACTATCTCAGTCCCAAAATTTATGAAGTGTTTACTTTCT
TTGAGAGCAATAATGAAGACGATCACCGGATGAGGCAGATCATGAAGTTT
GGGTTCCCTGGCCTGGATGACTTGCGTCTGTATAGTGACTTCGTACTATC
CTACGATCGCCGAAACCGAGTGGCCCACTGGGTGTGCGAGCACCTCCAGG
CGGACAGCATACATCCGAATCGAGGCAGACGTGGTCGCAACCCATACCAG
CCGGATTTGAGTGTTCCCTCCAACTTCCGATCGGAACTGAGCGACTATCG
GAGATCTGGATTCGACCGAGGACACTTGGCAGCCGCAGGAAATCACCATC
TGCAACAGAATCACTGCGAGGATACGTTTTTCCTAACGAATATTGCCCCA
CAAGTGGGCCAGGGCTTCAACCGAAGCGCGTGGAACAACTTGGAACAATA
TGTTCGAAATCTGGTCCACCGATTTGGATCCGTTTTCGTGTGTACTGGTC
CACTATATAAGCCCAATCAAAGACCGGGAGGTAAGTGGGCCGTGGAGTAC
GAGATGATCGGACTGAATATGGTTGCAGTTCCGACGCACTTCTTCAAGGT
GATCATGGTGGAATCAAAACTGCACCTGGGTAAACCCTATATGGAGGGCT
ATGTCCTGCCCAATGCTCCAATACCAGATGGTCTGCCACTACGATCGTTT
CTCTGCGACATCCGGGAGATTGAGCACTACGCAGGTCTCAAGTTCTTCGA
TGGTTTGAGAAGGAGTGCCCTATTCGGCAGCAATTATCCAAGTGAATCTC
GAGTTTTTCGCGAATTCAGTTAGAAGCTTTCTAGACCAT
BS20318.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:29:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl2-RA | 957 | CG32463-PA | 1..957 | 17..973 | 4785 | 100 | Plus |
| EndoG-RA | 933 | CG8862-PA | 463..563 | 473..573 | 250 | 83.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:29:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl2-RA | 1018 | CG32463-RA | 19..976 | 16..973 | 4790 | 100 | Plus |
| EndoG-RA | 1124 | CG8862-RA | 543..643 | 473..573 | 250 | 83.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:29:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2238346..2239129 | 973..190 | 3920 | 100 | Minus |
| 2L | 23513712 | 2L | 2239192..2239366 | 190..16 | 875 | 100 | Minus |
| 2R | 25286936 | 2R | 12177911..12178011 | 573..473 | 250 | 83.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:29:46 has no hits.
BS20318.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:56 Download gff for
BS20318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32463-RA | 20..976 | 17..973 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:38 Download gff for
BS20318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl2-RA | 20..976 | 17..973 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:40 Download gff for
BS20318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl2-RA | 20..976 | 17..973 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:40 Download gff for
BS20318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2238346..2239128 | 191..973 | 100 | <- | Minus |
| 2L | 2239192..2239365 | 17..190 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:38 Download gff for
BS20318.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2238346..2239128 | 191..973 | 100 | <- | Minus |
| arm_2L | 2239192..2239365 | 17..190 | 100 | | Minus |
BS20318.pep Sequence
Translation from 16 to 972
> BS20318.pep
MDRKWQLLGLGFVLGVTALCASFVGGMYFQHTDARKRLRELIQTDPYAYY
LSPKIYEVFTFFESNNEDDHRMRQIMKFGFPGLDDLRLYSDFVLSYDRRN
RVAHWVCEHLQADSIHPNRGRRGRNPYQPDLSVPSNFRSELSDYRRSGFD
RGHLAAAGNHHLQQNHCEDTFFLTNIAPQVGQGFNRSAWNNLEQYVRNLV
HRFGSVFVCTGPLYKPNQRPGGKWAVEYEMIGLNMVAVPTHFFKVIMVES
KLHLGKPYMEGYVLPNAPIPDGLPLRSFLCDIREIEHYAGLKFFDGLRRS
ALFGSNYPSESRVFREFS*
BS20318.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl2-PA | 318 | CG32463-PA | 1..318 | 1..318 | 1727 | 100 | Plus |
| EndoG-PA | 310 | CG8862-PA | 8..302 | 15..302 | 675 | 47.8 | Plus |
| Tengl4-PA | 378 | CG4683-PA | 125..364 | 64..302 | 545 | 43.2 | Plus |
| Tengl1-PA | 319 | CG31682-PA | 8..276 | 13..300 | 460 | 34.2 | Plus |
| Tengl3-PA | 337 | CG31679-PA | 10..305 | 4..306 | 323 | 26.5 | Plus |
