BS20320.complete Sequence
401 bp assembled on 2011-01-07
GenBank Submission: KX805792
> BS20320.complete
GAAGTTATCAGTCGACATGCTCACCAGACAACCCGACTACACCATCTCCG
AGCTGGGCCATCCCATCCATCAGTGGTCGGATTCGACCGCGTGCGAGTCC
CTCAAGAAGCTGGACTACACAAAGATGCCCAGTTCTCCGCCATCACCACA
TCGCCTGCTGCCACTGAGGGAAACGTTGGACGATTGTTTCAAGCGCTTGA
CGATGAGGAGCAGAGAAGATTTCGAAGAGGATCCCGTATACCAGCAGAAA
TTGAGAAAGAATCAGTGCAATGAACAGCAGCGAAGGCGCAATCAAAAATG
TCGAGATAAAGCCCAGTCCGGAGCAACAACGACGACGACGACGACGACAA
CGATAGCGGCGAGCTGCGATTTAAACAATTTCTGAAAGCTTTCTAGACCA
T
BS20320.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31710-RC | 369 | CG31710-PC | 1..369 | 17..385 | 1845 | 100 | Plus |
| CG31710-RA | 369 | CG31710-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
| CG31710-RD | 372 | CG31710-PD | 1..372 | 17..385 | 1780 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31710-RC | 795 | CG31710-RC | 309..677 | 17..385 | 1845 | 100 | Plus |
| CG31710-RA | 728 | CG31710-RA | 242..610 | 17..385 | 1845 | 100 | Plus |
| CG31710-RD | 1253 | CG31710-RD | 242..613 | 17..385 | 1780 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9703268..9703539 | 288..17 | 1360 | 100 | Minus |
| 2L | 23513712 | 2L | 9703082..9703179 | 385..288 | 490 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:30:08 has no hits.
BS20320.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:57 Download gff for
BS20320.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31710-RA | 232..599 | 17..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:43 Download gff for
BS20320.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31710-RA | 242..609 | 17..384 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:47 Download gff for
BS20320.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31710-RA | 242..609 | 17..384 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:47 Download gff for
BS20320.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9703083..9703178 | 289..384 | 100 | <- | Minus |
| 2L | 9703268..9703539 | 17..288 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:43 Download gff for
BS20320.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9703083..9703178 | 289..384 | 100 | <- | Minus |
| arm_2L | 9703268..9703539 | 17..288 | 100 | | Minus |
BS20320.pep Sequence
Translation from 16 to 384
> BS20320.pep
MLTRQPDYTISELGHPIHQWSDSTACESLKKLDYTKMPSSPPSPHRLLPL
RETLDDCFKRLTMRSREDFEEDPVYQQKLRKNQCNEQQRRRNQKCRDKAQ
SGATTTTTTTTTIAASCDLNNF*
BS20320.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31710-PC | 122 | CG31710-PC | 1..122 | 1..122 | 656 | 100 | Plus |
| CG31710-PA | 122 | CG31710-PA | 1..122 | 1..122 | 656 | 100 | Plus |
| CG31710-PD | 123 | CG31710-PD | 1..123 | 1..122 | 644 | 99.2 | Plus |
