BS20325.complete Sequence
434 bp assembled on 2011-01-07
GenBank Submission: KX804507
> BS20325.complete
GAAGTTATCAGTCGACATGGAATCAGCCGTACGAAAGCGCAGAGTTCCCT
TTCTCCAGGACAATAGACATTCCGATAAACGGACATGCAACTTGTCAACA
ATATCACCTCGCAGCACTCTAGTTCAAACAGTAAAGAAACCCGTCAAGAA
GTTCTCTTCGGATTTAGCCAATCTTCCACCGGTTCCCGCAATCGATGCTT
TTGAGCGAGGCTACCAAGTGGAATCGATATTGGACATGGTACAAAACATC
CACAAGGAGCAATTCCTCTACATAAAGTTTACGAATCTCATTGAACCCGA
GTTGGTTCCTTTGGAACTGGCCTTACAGCATGTTCCACACCTGCTTTCTG
ATTTCTACAAGGAATACGTCCAGGCCTGGCAGAAAATGGAACAACAGAAG
TATGATGAATCTCCTTAAAAGCTTTCTAGACCAT
BS20325.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-RA | 402 | CG42448-PA | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-RA | 670 | CG42448-RA | 47..450 | 17..420 | 2020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15547668..15548023 | 65..420 | 1780 | 100 | Plus |
2L | 23513712 | 2L | 15547565..15547612 | 17..64 | 240 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:30:44 has no hits.
BS20325.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:59 Download gff for
BS20325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42448-RA | 47..446 | 17..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:50 Download gff for
BS20325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skadu-RA | 47..446 | 17..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:00 Download gff for
BS20325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Skadu-RA | 47..446 | 17..416 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:00 Download gff for
BS20325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15547565..15547612 | 17..64 | 100 | -> | Plus |
2L | 15547668..15548019 | 65..416 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:50 Download gff for
BS20325.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15547565..15547612 | 17..64 | 100 | -> | Plus |
arm_2L | 15547668..15548019 | 65..416 | 100 | | Plus |
BS20325.pep Sequence
Translation from 16 to 417
> BS20325.pep
MESAVRKRRVPFLQDNRHSDKRTCNLSTISPRSTLVQTVKKPVKKFSSDL
ANLPPVPAIDAFERGYQVESILDMVQNIHKEQFLYIKFTNLIEPELVPLE
LALQHVPHLLSDFYKEYVQAWQKMEQQKYDESP*
BS20325.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Skadu-PA | 133 | CG42448-PA | 1..133 | 1..133 | 689 | 100 | Plus |