BS20334.complete Sequence
365 bp assembled on 2011-01-07
GenBank Submission: KX802490
> BS20334.complete
GAAGTTATCAGTCGACATGAAATTCGTGATATTGCTATCCTTGATGTGCA
TCGGAATTGGTTATGCCCAACAACAGTCGGAAGTCAAATGCTTCATGGAC
GCCATTCCTGTGGGCGAATGTGGTAGTCGGATTATAGGGTATAGCTATTC
GAGTGTAAGAGCCCGTTGCGTAAACTATGAGACCATAGGTTGCGAGGTCA
TCGGAAATTTCTTCACCGACAGGAAAGTGTGTGAGGCCAAATGCAAACCG
CCGATCAGTTTTAGAAACAATCCATTCAGTTATTATTTCGAAAGAGCTTT
TAACCAGGCCCGCGATACTTTAAGAAGAATATTCAATCTACCTCAGTAAA
AGCTTTCTAGACCAT
BS20334.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Bb-RA | 333 | CG42462-PA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Bb-RA | 456 | CG42462-RA | 67..401 | 17..351 | 1675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3669316..3669585 | 351..82 | 1350 | 100 | Minus |
| 2L | 23513712 | 2L | 3669643..3669709 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:30:13 has no hits.
BS20334.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:57 Download gff for
BS20334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Bb-RA | 67..397 | 17..347 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:45 Download gff for
BS20334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Bb-RA | 67..397 | 17..347 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:49 Download gff for
BS20334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp24Bb-RA | 67..397 | 17..347 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:49 Download gff for
BS20334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3669320..3669583 | 84..347 | 100 | <- | Minus |
| 2L | 3669643..3669709 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:45 Download gff for
BS20334.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3669320..3669583 | 84..347 | 100 | <- | Minus |
| arm_2L | 3669643..3669709 | 17..83 | 100 | | Minus |
BS20334.pep Sequence
Translation from 16 to 348
> BS20334.pep
MKFVILLSLMCIGIGYAQQQSEVKCFMDAIPVGECGSRIIGYSYSSVRAR
CVNYETIGCEVIGNFFTDRKVCEAKCKPPISFRNNPFSYYFERAFNQARD
TLRRIFNLPQ*
BS20334.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp24Bb-PA | 110 | CG42462-PA | 1..110 | 1..110 | 589 | 100 | Plus |
| CG42463-PB | 111 | CG42463-PB | 13..97 | 7..97 | 148 | 35.2 | Plus |
