BS20340.complete Sequence
653 bp assembled on 2011-01-07
GenBank Submission: KX802855
> BS20340.complete
GAAGTTATCAGTCGACATGACCAAGGGCGTGAGGATTTGCAACGATGGAT
TGCCTGGTTTGCCGAATGAAAGGCCATATTCCCGAAGAACTTTAGATACG
CGGCAAAAGACTCAGAAGATGTCCTCCAGGCCATCTAGGAAACCATTGCA
GTCTCTACAAACTGTCGGTCGGAATACGAGTTCCAGCCTGAAGCGCATAG
GAAGTCCGATCTCCGAGGAAGAATTTGGTGTCCTGGTGCAGCAGGATTGT
AAGGCAGAGCAGCATCACACCGATCGCCAAAACCTGGCGGACATAATCCT
TATGCAGGCCCGTCGCATCGAGAAGCAGCAGCGGGAGATGAAAAGAATAA
AGGCGCACTATGAGCGCCAGGTGTCCACCATCAAGAACAATGCCATCATG
CTGGAGTCGCATCTGCAAAAGGTGCTGGCCAGTGTCGAAAGGGATCGGGC
CAAGCGGATTGGCCACCACTGCCAGGACATGCTCGGTGCCGTGGAGAAGC
TGCAAAGGAGCGACATCCAAGTGAAGCCGCAATCTTCGGCCAACCAATTG
CTGATCCAGTATCTTCACTCCAAGAAAATTTCGCATTCGACCAAGAAGTC
CAATGAAAACACAAGTAGGTACAGGAATATGTTGTGAAAGCTTTCTAGAC
CAT
BS20340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-RB | 621 | CG6333-PB | 1..621 | 17..637 | 3105 | 100 | Plus |
CG6333-RA | 621 | CG6333-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-RB | 2133 | CG6333-RB | 1397..2018 | 17..638 | 3110 | 100 | Plus |
CG6333-RA | 1028 | CG6333-RA | 296..917 | 17..638 | 3110 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 17480244..17480865 | 638..17 | 3110 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:32:03 has no hits.
BS20340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:05 Download gff for
BS20340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RB | 1397..2016 | 17..636 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:14 Download gff for
BS20340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RA | 296..915 | 17..636 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:31 Download gff for
BS20340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6333-RA | 296..915 | 17..636 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:31 Download gff for
BS20340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 17480246..17480865 | 17..636 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:14 Download gff for
BS20340.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 17473346..17473965 | 17..636 | 100 | | Minus |
BS20340.pep Sequence
Translation from 16 to 636
> BS20340.pep
MTKGVRICNDGLPGLPNERPYSRRTLDTRQKTQKMSSRPSRKPLQSLQTV
GRNTSSSLKRIGSPISEEEFGVLVQQDCKAEQHHTDRQNLADIILMQARR
IEKQQREMKRIKAHYERQVSTIKNNAIMLESHLQKVLASVERDRAKRIGH
HCQDMLGAVEKLQRSDIQVKPQSSANQLLIQYLHSKKISHSTKKSNENTS
RYRNML*
BS20340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6333-PB | 206 | CG6333-PB | 1..206 | 1..206 | 1045 | 100 | Plus |
CG6333-PA | 206 | CG6333-PA | 1..206 | 1..206 | 1045 | 100 | Plus |