BS20345.complete Sequence
698 bp assembled on 2011-01-07
GenBank Submission: KX800553
> BS20345.complete
GAAGTTATCAGTCGACATGTCGGTGCCAATCCGCTTTCGCAGTCGACGAG
TTGGAGCTGCGCAAGAACCACCAAGAGCTGCCCGCAAAGACATGACTACA
TGCAGTGTGACCAGCACACCAGCGCGGTTTGCCCGCTGCCTGGCTAACTT
CCAGGTGGACGAGCTGCTGCTGTTAAAGAAGTCCGTGATGAGTATGGAGG
CGCTGGATAAGAACGATAGTCTCCAGCCGACTACGGAATGCCCACAGATG
GCGCCGGATGGATCGCCACTGCCAGAGCGAATGGCCTTGATGGCCGCAGA
TCGGGGTGAGCACGACACCACTGGCTCCCATGGTCCCTGGCACTCCCATC
CACACGCGCCGACTTCCTGGACCGAGGAAAAGCCCTCAAAGTTGCAGACC
CTATTCCAGATCAGCATTACGGCCCTGGCCTTTCTCTCCTTCGGCGGCTA
TCTACTCTGCCTAATCGTGCAGGCCATCAAGAGCAAGGGCACCACCTACT
TCCATCCGGTGGCCACGGCCACGACCAGCTCATCCACAAGCAATGTGAAA
CGCATCAAGATATACCGCCGCAGCAAGCGCAGCTCTGTGCGCCCCGATAC
CGATCTGCCAACCCTGCTGCAGCAGGACTACGCCTCCTACATGAAATCTT
TGCGAGATCGCGGCTGGGGCATGCTTACCTAGAAGCTTTCTAGACCAT
BS20345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-RC | 666 | CG14797-PC | 1..666 | 17..682 | 3330 | 100 | Plus |
| CG14797-RB | 591 | CG14797-PB | 1..591 | 92..682 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-RC | 3151 | CG14797-RC | 2051..2716 | 17..682 | 3330 | 100 | Plus |
| CG14797-RB | 1470 | CG14797-RB | 370..1035 | 17..682 | 3330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1684077..1684456 | 303..682 | 1900 | 100 | Plus |
| X | 23542271 | X | 1683828..1684025 | 107..304 | 990 | 100 | Plus |
| X | 23542271 | X | 1683670..1683760 | 17..107 | 455 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:32:50 has no hits.
BS20345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:07 Download gff for
BS20345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 1..591 | 92..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:22 Download gff for
BS20345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 370..1035 | 17..682 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:48 Download gff for
BS20345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14797-RB | 370..1035 | 17..682 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:48 Download gff for
BS20345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1683670..1683760 | 17..107 | 100 | -> | Plus |
| X | 1683829..1684024 | 108..303 | 100 | -> | Plus |
| X | 1684078..1684456 | 304..682 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:22 Download gff for
BS20345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1577703..1577793 | 17..107 | 100 | -> | Plus |
| arm_X | 1577862..1578057 | 108..303 | 100 | -> | Plus |
| arm_X | 1578111..1578489 | 304..682 | 100 | | Plus |
BS20345.pep Sequence
Translation from 16 to 681
> BS20345.pep
MSVPIRFRSRRVGAAQEPPRAARKDMTTCSVTSTPARFARCLANFQVDEL
LLLKKSVMSMEALDKNDSLQPTTECPQMAPDGSPLPERMALMAADRGEHD
TTGSHGPWHSHPHAPTSWTEEKPSKLQTLFQISITALAFLSFGGYLLCLI
VQAIKSKGTTYFHPVATATTSSSTSNVKRIKIYRRSKRSSVRPDTDLPTL
LQQDYASYMKSLRDRGWGMLT*
BS20345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14797-PC | 221 | CG14797-PC | 1..221 | 1..221 | 1150 | 100 | Plus |
| CG14797-PB | 196 | CG14797-PB | 1..196 | 26..221 | 1025 | 100 | Plus |
