BS20346.complete Sequence
467 bp assembled on 2011-01-07
GenBank Submission: KX804607
> BS20346.complete
GAAGTTATCAGTCGACATGGGAAAAAGTGAGAAAAAATCAAAGAAAAAGC
ATAAGGAGAAGCGCAGGGAACACAAGGAAAAGCACAAGTCAAAGAAATCC
AAGAAACACAACCGAAAAAAGGAAGAATCTCCGCCGATAGCTTCACCAAC
ACCAATACAGCCTGAAAGGGTCAACCAGGAGGAGGAGGATGACTTTGCCA
TACCAATAGCACTGATGAATAGCAAATCACATGCCCCGGAAACTCCAGAG
GAATACCAGCGCCGTCAGAGCCAGATCCGCAAAGAGGTGGACCCGGTGAC
GGGTCGCGTCCGGCTCATCAAAGGCGACAGTGAGGTGCTGGAAGAGATTG
TGACCAAAGAGCGCCACCTGGAGATCAACAAGAAGGCCACCCGCGGTGAT
GGAGAGTTCTACGAAGCCAGATCTCTGGACGCCGCCAAGCGTCGCAAATA
GAAGCTTTCTAGACCAT
BS20346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:31:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-RA | 435 | CG18428-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
| CG18428-RC | 237 | CG18428-PC | 1..237 | 215..451 | 1185 | 100 | Plus |
| CG18428-RB | 201 | CG18428-PB | 1..193 | 17..209 | 965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-RA | 577 | CG18428-RA | 30..464 | 17..451 | 2175 | 100 | Plus |
| CG18428-RB | 644 | CG18428-RB | 288..531 | 208..451 | 1220 | 100 | Plus |
| CG18428-RC | 523 | CG18428-RC | 167..410 | 208..451 | 1220 | 100 | Plus |
| CG18428-RB | 644 | CG18428-RB | 30..222 | 17..209 | 965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24109654..24109897 | 208..451 | 1220 | 100 | Plus |
| 3R | 32079331 | 3R | 24109396..24109588 | 17..209 | 965 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:31:50 has no hits.
BS20346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:03 Download gff for
BS20346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 16..444 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:10 Download gff for
BS20346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 30..458 | 17..445 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:26 Download gff for
BS20346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18428-RA | 30..458 | 17..445 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:26 Download gff for
BS20346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24109396..24109588 | 17..209 | 100 | -> | Plus |
| 3R | 24109656..24109891 | 210..445 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:10 Download gff for
BS20346.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19935118..19935310 | 17..209 | 100 | -> | Plus |
| arm_3R | 19935378..19935613 | 210..445 | 100 | | Plus |
BS20346.pep Sequence
Translation from 16 to 450
> BS20346.pep
MGKSEKKSKKKHKEKRREHKEKHKSKKSKKHNRKKEESPPIASPTPIQPE
RVNQEEEDDFAIPIALMNSKSHAPETPEEYQRRQSQIRKEVDPVTGRVRL
IKGDSEVLEEIVTKERHLEINKKATRGDGEFYEARSLDAAKRRK*
BS20346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18428-PA | 144 | CG18428-PA | 1..144 | 1..144 | 739 | 100 | Plus |
| CG18428-PC | 78 | CG18428-PC | 1..78 | 67..144 | 394 | 100 | Plus |
| CG18428-PB | 66 | CG18428-PB | 1..64 | 1..64 | 337 | 100 | Plus |
