BS20347.complete Sequence
707 bp assembled on 2011-01-07
GenBank Submission: KX803140
> BS20347.complete
GAAGTTATCAGTCGACATGCCCCACTGCCACACAATGGTCTATATGCGAA
TTGTGCTAACAACCTTGGTGACCATTACGTGTCTGCTGGGGGACAACTTT
GTGGAGCTGACCCAGCATCCATTGCTGAAGGCCCTGGCCGACAATGCCAC
CCATGCGGCCATTGGAGCACTCACGGGAATCACGTTCGCCACACAATTCT
ACGAGCGCACCTCGCAGTTGTTCGGCTGGATATTGATTTTCACCTGCTTC
GTTGTGTCATCGTTCATTGACTTGGACCACTTTGTGGAGGCTCGTTCCCT
TTATTTGGAGGATGCCACCAATCTGTCGAAGAGGCCCTTCCTCCACTGCT
CCAGCATTATAGTGGTTATGCTGCTGTTCTACATGTGCACCGCCTGTTTG
AACTATTTCCGGACCAGCCTAATGCTGGGATCCCTACTCTGTGCCTTCAT
CACACACCACACCAGGGACGCCGTGCGGCGGGGCTACTGGCTGTGCCCGC
TAGGTCACACGGACAGGATGCCCCAGCTAGCCTACATATTGACCACCATC
CTGACGCCCCATCTGCTGGGCTGCCTGCACAACGTGTGCCGCAGCGCAAC
CGTGCTTAACTTCCTGGGGCAGTACGTCAAGCTAAGCGAGGGCCAATACC
GCAGCGGCTCCACTGCCAACTATCGCTACATGCAGGTCTAGAAGCTTTCT
AGACCAT
BS20347.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-RB | 675 | CG10866-PB | 1..675 | 17..691 | 3375 | 100 | Plus |
| CG10866-RA | 675 | CG10866-PA | 1..675 | 17..691 | 3375 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-RB | 1874 | CG10866-RB | 247..921 | 17..691 | 3375 | 100 | Plus |
| CG10866-RA | 1337 | CG10866-RA | 247..921 | 17..691 | 3375 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3937013..3937395 | 691..309 | 1915 | 100 | Minus |
| 3L | 28110227 | 3L | 3937452..3937746 | 311..17 | 1475 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:31:59 has no hits.
BS20347.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:04 Download gff for
BS20347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 196..870 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:12 Download gff for
BS20347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 196..870 | 17..691 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:30 Download gff for
BS20347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10866-RA | 247..921 | 17..691 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:30 Download gff for
BS20347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3937013..3937393 | 311..691 | 100 | <- | Minus |
| 3L | 3937453..3937746 | 17..310 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:12 Download gff for
BS20347.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3937013..3937393 | 311..691 | 100 | <- | Minus |
| arm_3L | 3937453..3937746 | 17..310 | 100 | | Minus |
BS20347.pep Sequence
Translation from 16 to 690
> BS20347.pep
MPHCHTMVYMRIVLTTLVTITCLLGDNFVELTQHPLLKALADNATHAAIG
ALTGITFATQFYERTSQLFGWILIFTCFVVSSFIDLDHFVEARSLYLEDA
TNLSKRPFLHCSSIIVVMLLFYMCTACLNYFRTSLMLGSLLCAFITHHTR
DAVRRGYWLCPLGHTDRMPQLAYILTTILTPHLLGCLHNVCRSATVLNFL
GQYVKLSEGQYRSGSTANYRYMQV*
BS20347.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10866-PB | 224 | CG10866-PB | 1..224 | 1..224 | 1189 | 100 | Plus |
| CG10866-PA | 224 | CG10866-PA | 1..224 | 1..224 | 1189 | 100 | Plus |
