BS20350.complete Sequence
431 bp assembled on 2011-01-07
GenBank Submission: KX802021
> BS20350.complete
GAAGTTATCAGTCGACATGAGGAAATCACTACTGATCGTTGGCTCCCTCC
TGGTGACCATCTTTCTGGCCCATCTGCCAGTTGGTCTAGCCGTCTCGTGT
GCCGATGATCCCACCGATACGGCTTGCATCGATTGCACAGATACCGCGAA
TGCAGCTGAAGCCGATTGTACCACAACCACGGCTGCTCCGGAGGTAACCA
CAGCTGCCGCAGAGGTAACCACAGCGGCCAGTGCCGATGGAGAAACCACC
ACCGCAGCCGCTTCGGCCACCGACACGACCACCGCCTCATCCGGAGGCAG
TGGCAAGAAGCGCGTGAGGAGGACCTTCAGGCGTAAGGTGAGCCGCCCCA
GGAAGATCAAGAAGAGGAGGAGCAACCGAGGCAGGAACAATAGGAGGAGC
CAAAACTCGGGCTAAAAGCTTTCTAGACCAT
BS20350.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13135-RC | 399 | CG13135-PC | 1..399 | 17..415 | 1995 | 100 | Plus |
| CG13135-RA | 399 | CG13135-PA | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13135-RC | 643 | CG13135-RC | 31..431 | 15..415 | 2005 | 100 | Plus |
| CG13135-RA | 576 | CG13135-RA | 31..431 | 15..415 | 2005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10122341..10122741 | 415..15 | 2005 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:33:20 has no hits.
BS20350.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:09 Download gff for
BS20350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 33..429 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:30 Download gff for
BS20350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 33..429 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:04 Download gff for
BS20350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13135-RA | 33..429 | 17..413 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:04 Download gff for
BS20350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10122343..10122739 | 17..413 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:30 Download gff for
BS20350.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10122343..10122739 | 17..413 | 100 | | Minus |
BS20350.pep Sequence
Translation from 16 to 414
> BS20350.pep
MRKSLLIVGSLLVTIFLAHLPVGLAVSCADDPTDTACIDCTDTANAAEAD
CTTTTAAPEVTTAAAEVTTAASADGETTTAAASATDTTTASSGGSGKKRV
RRTFRRKVSRPRKIKKRRSNRGRNNRRSQNSG*
BS20350.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13135-PC | 132 | CG13135-PC | 1..132 | 1..132 | 658 | 100 | Plus |
| CG13135-PA | 132 | CG13135-PA | 1..132 | 1..132 | 658 | 100 | Plus |
| ng2-PA | 112 | CG14266-PA | 14..107 | 38..130 | 167 | 43.8 | Plus |
| ng1-PA | 107 | CG10781-PA | 14..105 | 38..128 | 166 | 44.7 | Plus |
| CG8087-PA | 142 | CG8087-PA | 23..126 | 25..131 | 158 | 36.6 | Plus |
