BS20351.complete Sequence
539 bp assembled on 2011-01-07
GenBank Submission: KX806336
> BS20351.complete
GAAGTTATCAGTCGACATGGATAAACTAACGACAATTAGTGCCACGCTCT
TCATGGCGGCCGATGTCTTTGCGATTGTGAGTCTGGCCCTTCCCGACTGG
ATCATCACGGAGTCCGGAACGGGTGACATCCGATTGGGACTGATGTGGAC
CTGCATGACGCTATATAACCGACCGCAAGTGTGCTATACACCCGAACTGC
AGCCGGAGTGGCTGATTGCACTGATCTGCATCTTTGTGGGCTGCATCTGC
GTGACCACCACCGTCATTCTGCTGGCGTCGTCATCCTGCAACCGGAATGT
GATTCCGTACGCGCGCTGGGTGGGATTCACGGCCATGGTGCTCTTCTGCA
TGGCGGCCGTCGTCTTCCCGCTGGGATTCCACGTAGAGGAGATCGGCGGA
CAGGCCTACCAGCTGCCCAACACATTCAAGATTGGCATCTCCTACATCAT
GTTCGTCCTGGCCCTGTGGATCACCGTCGTGTCTGAGCTCTTTGCCGGCA
AGGTCTGCCTGCCGCACTTCTAAAAGCTTTCTAGACCAT
BS20351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-RB | 507 | CG14182-PB | 1..507 | 17..523 | 2535 | 100 | Plus |
| CG14182-RD | 507 | CG14182-PD | 1..507 | 17..523 | 2535 | 100 | Plus |
| CG14182-RA | 507 | CG14182-PA | 1..507 | 17..523 | 2535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-RB | 626 | CG14182-RB | 51..558 | 17..524 | 2540 | 100 | Plus |
| CG14182-RD | 1032 | CG14182-RD | 51..558 | 17..524 | 2540 | 100 | Plus |
| CG14182-RA | 932 | CG14182-RA | 51..558 | 17..524 | 2540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19979187..19979589 | 524..122 | 2015 | 100 | Minus |
| 3L | 28110227 | 3L | 19979655..19979762 | 124..17 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:33:30 has no hits.
BS20351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:10 Download gff for
BS20351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 51..555 | 17..521 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:31 Download gff for
BS20351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 51..555 | 17..521 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:07 Download gff for
BS20351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14182-RA | 51..555 | 17..521 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:07 Download gff for
BS20351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19979190..19979588 | 123..521 | 100 | <- | Minus |
| 3L | 19979657..19979762 | 17..122 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:31 Download gff for
BS20351.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19972290..19972688 | 123..521 | 100 | <- | Minus |
| arm_3L | 19972757..19972862 | 17..122 | 100 | | Minus |
BS20351.pep Sequence
Translation from 16 to 522
> BS20351.pep
MDKLTTISATLFMAADVFAIVSLALPDWIITESGTGDIRLGLMWTCMTLY
NRPQVCYTPELQPEWLIALICIFVGCICVTTTVILLASSSCNRNVIPYAR
WVGFTAMVLFCMAAVVFPLGFHVEEIGGQAYQLPNTFKIGISYIMFVLAL
WITVVSELFAGKVCLPHF*
BS20351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14182-PB | 168 | CG14182-PB | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PD | 168 | CG14182-PD | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PA | 168 | CG14182-PA | 1..168 | 1..168 | 890 | 100 | Plus |
| CG14182-PC | 126 | CG14182-PC | 1..126 | 43..168 | 684 | 100 | Plus |
