BS20352.complete Sequence
344 bp assembled on 2011-01-07
GenBank Submission: KX805327
> BS20352.complete
GAAGTTATCAGTCGACATGACGCTCCACAAGCTGCCCGCCAAGTGCATTC
TGCTCGTGGTGTTGCTGCTCCTGCTGGACTCCAGCCTGGCCAGGTCGCAA
CAGTTCTTCGTCGCCGAGGATGTGATAACAGGAACGGCAACTGAAACGGG
AACTGCAGCTGCAAGCAGAACCGTATTTGGTGATGATCAATTGCCCATCA
ACGATCCATCGGATCTAAGTGCTGGTTTAAATTTGGCGCCCGTTGGCAGT
CTGATTGCGGCAGCAGCGAATGCCGTACCCCCTGCCCCTGTTCAATTTAT
TCGCACGGCCATGAACAGCGGGCTCTGAAAGCTTTCTAGACCAT
BS20352.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14406-RB | 312 | CG14406-PB | 1..312 | 17..328 | 1560 | 100 | Plus |
| CG14406-RA | 312 | CG14406-PA | 1..312 | 17..328 | 1560 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14406-RB | 375 | CG14406-RB | 27..338 | 17..328 | 1560 | 100 | Plus |
| CG14406-RA | 667 | CG14406-RA | 27..338 | 17..328 | 1560 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14910624..14910819 | 212..17 | 980 | 100 | Minus |
| X | 23542271 | X | 14910202..14910318 | 328..212 | 585 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:33:35 has no hits.
BS20352.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:11 Download gff for
BS20352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 27..337 | 17..327 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:34 Download gff for
BS20352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 27..337 | 17..327 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:08 Download gff for
BS20352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14406-RA | 27..337 | 17..327 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:08 Download gff for
BS20352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14910203..14910317 | 213..327 | 100 | <- | Minus |
| X | 14910624..14910819 | 17..212 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:34 Download gff for
BS20352.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14804657..14804852 | 17..212 | 100 | | Minus |
| arm_X | 14804236..14804350 | 213..327 | 100 | <- | Minus |
BS20352.pep Sequence
Translation from 16 to 327
> BS20352.pep
MTLHKLPAKCILLVVLLLLLDSSLARSQQFFVAEDVITGTATETGTAAAS
RTVFGDDQLPINDPSDLSAGLNLAPVGSLIAAAANAVPPAPVQFIRTAMN
SGL*
BS20352.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14406-PB | 103 | CG14406-PB | 1..103 | 1..103 | 503 | 100 | Plus |
| CG14406-PA | 103 | CG14406-PA | 1..103 | 1..103 | 503 | 100 | Plus |
