BS20356.complete Sequence
758 bp assembled on 2011-01-07
GenBank Submission: KX805586
> BS20356.complete
GAAGTTATCAGTCGACATGCCAACAAATGGCCATAAATACAGCATTTTGA
TGCCCACTTACAATGAAAAGGATAATTTGCCCATTATAATATGGCTAATT
GTGAAATACATGAAGGCGAGCGGCTTGGAATACGAGGTGATTGTGATTGA
TGATGGTAGTCCGGATGGAACACTAGACGTGGCCAAAGACCTGCAGAAGA
TCTACGGGGAGGACAAGATTGTGCTGAGACCACGTGGCTCCAAATTGGGA
CTCGGAACGGCCTACATACATGGCATCAAACATGCCACCGGCGACTTTAT
AGTTATCATCGATGCGGACTTGAGTCATCATCCCAAATTCATTCCCGAGT
TCATTAAGCTGCAACAGGAGGGCAACTATGACATTGTATCCGGCACTCGG
TATGCCGGAAATGGAGGTGTCTTTGGCTGGGACTTCAAGCGCAAGCTCAT
CTCGCGCGGCGCCAACTTTTTGTCCCAGGTGCTTTTACGTCCGAACGCCA
GTGATTTGACCGGCTCCTTCAGGCTCTACAAGAAGGATGTACTGGAGAAA
TGCATTGCCAGCTGCGTGTCCAAAGGCTACGTGTTCCAAATGGAGATGCT
CGTTCGGGCTAGACAGCACGGCTACACCATCGCCGAGGTGCCCATCACCT
TCGTGGACCGTATTTATGGCACCTCCAAGCTCGGCGGGACCGAGATTATT
CAGTTTGCCAAGAACCTTTTGTATCTGTTTGCGACCACATAAAAGCTTTC
TAGACCAT
BS20356.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-RA | 726 | CG10166-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-RA | 810 | CG10166-RA | 45..771 | 17..743 | 3635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19525473..19525888 | 743..328 | 2065 | 99.8 | Minus |
| 2L | 23513712 | 2L | 19525953..19526165 | 331..119 | 1065 | 100 | Minus |
| 2L | 23513712 | 2L | 19526221..19526324 | 120..17 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:33:48 has no hits.
BS20356.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:13 Download gff for
BS20356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 24..747 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:40 Download gff for
BS20356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 45..768 | 17..740 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:16 Download gff for
BS20356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10166-RA | 45..768 | 17..740 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:16 Download gff for
BS20356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19525953..19526163 | 121..331 | 100 | <- | Minus |
| 2L | 19525476..19525884 | 332..740 | 100 | <- | Minus |
| 2L | 19526221..19526324 | 17..120 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:40 Download gff for
BS20356.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19525476..19525884 | 332..740 | 100 | <- | Minus |
| arm_2L | 19525953..19526163 | 121..331 | 100 | <- | Minus |
| arm_2L | 19526221..19526324 | 17..120 | 100 | | Minus |
BS20356.pep Sequence
Translation from 16 to 741
> BS20356.pep
MPTNGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPD
GTLDVAKDLQKIYGEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDA
DLSHHPKFIPEFIKLQQEGNYDIVSGTRYAGNGGVFGWDFKRKLISRGAN
FLSQVLLRPNASDLTGSFRLYKKDVLEKCIASCVSKGYVFQMEMLVRARQ
HGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT*
BS20356.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10166-PA | 241 | CG10166-PA | 1..241 | 1..241 | 1256 | 100 | Plus |
| wol-PA | 326 | CG7870-PA | 69..285 | 9..214 | 165 | 26.4 | Plus |
