BS20361.complete Sequence
782 bp assembled on 2011-01-07
GenBank Submission: KX805170
> BS20361.complete
GAAGTTATCAGTCGACATGTCGACGTTACCCTTTTTGCTGAGCGTCGCCG
ACGAGCTGGACAACATACACTCACAGTCCTACATGGATGACTTTGGCTTG
GGCTTCCATCCGCACCGCCAGTACTATCGCACACCCACCATTCAGTTGTC
CCTGCCCGCCAGCACCGACTGGACGGGATCGGGTCGGGACTGGTCCCAGA
CAGCGGGCAACAGGCATACTCGCTACCGCAGCTATAAGTTTTACGATGAC
TCACAGAACAATCTGGAGGAGGAGGAGCCGCCCGTGGAGGATCCTCAACC
CATTGAACAGATGAAGTTGCCACAGCAGTTGGTCCAGCAGACCAACCAGA
CGATATCGGATCCCCAGCAACCGACGAGTGCAACTGCCACTGCAGCCACA
ACTCGCAAGGGACTGGGCATGGTCAACTCCCACTCGCATGATGTGGGTGT
TGGTGGTCTGGGCCTGAATCTCAAAGCTGACGAGGATGAGGACGATGAGA
ACATCGATCGCACGGTGCGCATGTATAATTTGTCCAAGAAGTGCTGCAAG
AACTACTATCGGCACGCCTTGGAGACCGGACCCGGCGCCAGTGGCAAGGT
CAAGTGCAGCAATGCGCGCTCCGAGAGCCATAAGTCCAGCTCCAGTTCGG
AGGAAAGCCTCCAGAAGATACCCTCGCCCATAGAGTTCCTCACCTGCTTT
CTGGTGAAGAAGTCGCGCACCCCCAAGGCAAATGTGCCAGTTGGGCAGCC
GCTGAAGAAGACATAGAAGCTTTCTAGACCAT
BS20361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13685-RD | 1011 | CG13685-PD | 1..752 | 17..768 | 3760 | 100 | Plus |
| CG13685-RB | 888 | CG13685-PB | 1..752 | 17..768 | 3760 | 100 | Plus |
| CG13685-RC | 750 | CG13685-PC | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13685-RD | 2456 | CG13685-RD | 273..1025 | 16..768 | 3765 | 100 | Plus |
| CG13685-RC | 3209 | CG13685-RC | 273..1025 | 16..768 | 3765 | 100 | Plus |
| CG13685-RB | 2456 | CG13685-RB | 273..1025 | 16..768 | 3765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7747616..7748368 | 16..768 | 3765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:34:00 has no hits.
BS20361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:14 Download gff for
BS20361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RA | 1..750 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:45 Download gff for
BS20361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RA | 274..1023 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:22 Download gff for
BS20361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13685-RB | 274..1023 | 17..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:22 Download gff for
BS20361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7747617..7748366 | 17..766 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:45 Download gff for
BS20361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7740717..7741466 | 17..766 | 100 | | Plus |
BS20361.pep Sequence
Translation from 16 to 765
> BS20361.pep
MSTLPFLLSVADELDNIHSQSYMDDFGLGFHPHRQYYRTPTIQLSLPAST
DWTGSGRDWSQTAGNRHTRYRSYKFYDDSQNNLEEEEPPVEDPQPIEQMK
LPQQLVQQTNQTISDPQQPTSATATAATTRKGLGMVNSHSHDVGVGGLGL
NLKADEDEDDENIDRTVRMYNLSKKCCKNYYRHALETGPGASGKVKCSNA
RSESHKSSSSSEESLQKIPSPIEFLTCFLVKKSRTPKANVPVGQPLKKT*
BS20361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13685-PC | 249 | CG13685-PC | 1..249 | 1..249 | 1321 | 100 | Plus |
| CG13685-PA | 249 | CG13685-PA | 1..249 | 1..249 | 1321 | 100 | Plus |
| CG13685-PB | 295 | CG13685-PB | 1..249 | 1..249 | 1321 | 100 | Plus |
| CG13685-PD | 336 | CG13685-PD | 1..249 | 1..249 | 1321 | 100 | Plus |
