BS20362.complete Sequence
407 bp assembled on 2011-01-07
GenBank Submission: KX805473
> BS20362.complete
GAAGTTATCAGTCGACATGGCACTCTATTATATTTTGGTGATCAGTGTCC
TGCTTGTCCTCGCCCAAGGATCGTATTTGTCGTCGGTGAATCAGGAATCC
GGGGTGGGAGTGCATCAGTCTGGAGCTATTTCATCTAGAGCTCCAGCTGC
CGGAATAACCCGTGGCTACTCCGCTGCCCCTCAGACCCAACGACCCATCT
CTGGATATGGATCCCTCTCTGGTCCTGTTGGAGGATCCCGTCGAGTGCCC
GTAGTTGGAGTGACCGGATCTCGTCCTCGTGGTGGAGCTCCGCGTAGTCC
GTCTGCTGGAGCTCATGGACGTCCAAATGTAGGTGGATCTGCCCATGGAA
ATTCCTACCAGAATCGCCAACGCAGCCAAAAGCCTTATTAAAAGCTTTCT
AGACCAT
BS20362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14332-RA | 375 | CG14332-PA | 1..375 | 17..391 | 1875 | 100 | Plus |
| CG42834-RA | 369 | CG42834-PA | 194..328 | 210..344 | 225 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14332-RA | 513 | CG14332-RA | 27..401 | 17..391 | 1875 | 100 | Plus |
| CG42834-RA | 536 | CG42834-RA | 220..354 | 210..344 | 225 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17421802..17422176 | 391..17 | 1875 | 100 | Minus |
| 3R | 32079331 | 3R | 17418978..17419112 | 210..344 | 225 | 77.8 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:27:40 has no hits.
BS20362.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:47 Download gff for
BS20362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14332-RA | 27..399 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:11 Download gff for
BS20362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14332-RA | 27..399 | 17..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:51 Download gff for
BS20362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14332-RA | 27..399 | 17..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:51 Download gff for
BS20362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17421804..17422176 | 17..389 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:11 Download gff for
BS20362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13247526..13247898 | 17..389 | 100 | | Minus |
BS20362.pep Sequence
Translation from 16 to 390
> BS20362.pep
MALYYILVISVLLVLAQGSYLSSVNQESGVGVHQSGAISSRAPAAGITRG
YSAAPQTQRPISGYGSLSGPVGGSRRVPVVGVTGSRPRGGAPRSPSAGAH
GRPNVGGSAHGNSYQNRQRSQKPY*
BS20362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:51:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14332-PA | 124 | CG14332-PA | 1..124 | 1..124 | 632 | 100 | Plus |
| CG42834-PA | 122 | CG42834-PA | 1..122 | 1..124 | 304 | 54.8 | Plus |
