Clone BS20367 Report

Search the DGRC for BS20367

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:203
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG32655-RA
Protein status:BS20367.pep: full length peptide match
Sequenced Size:1025

Clone Sequence Records

BS20367.complete Sequence

1025 bp assembled on 2011-01-07

GenBank Submission: KX802628

> BS20367.complete
GAAGTTATCAGTCGACATGGCCGAGAAGAAATCCCAGGACAATAAGGATA
ATGTCAGTGGATCCCAGAATCGAACGAGCCGCGTGGAAGCCCATGTTCGC
CAGCAAGAAGAGAATAATGCTATATTTGCTCGACTTTTTGCCAGTTTGGA
CGCTGAACATCGTAAATTGAAAGAACTTGAAGAGCGCAGATCGCAGCTAA
TTGAAGAAATGAAAAATTTGAGGTCTCTACTCTTTGTTGAGAATAAAAAA
CTTCGACAGACCGTTGCTCCCATTTCGGGTGGAAATCCATTACCAATTCC
AGCTACCAGTGCTAGTTCCGTCGTGAAAAAGAGTTCGGAGAAACCTTCTG
GCTCTAGGACCTCTCCCATTATCAAGTCAGCACGTTTGGAACGACGACCT
TCCAATAAATCGGTTACAATTGCCGATCCACCAACACAAAGTTTAACGAC
TAGCGAAAGACCCAAGGCAAGTAGTTCACAAGGTTTAAAGAAAAAGGAAA
ATCGACGAAGTCTCGTTGTTCCAGCAAGGAAAAATAAACATAGAATAACT
TTGGATAACTTATCAAATACCAGAGAGGACATGTTAGACGAGTTCGATGA
ATCCGCATTGGCAACTTCTGTGGGCTCCAATTTGCAGACTTTGGAGCAGC
GAAGATCCAATTTAGAGGAACGAGAAGATATAGACGAAGTTTTGGTCTCG
CTGTCAGCATTATTCACCTTTGTGGATTCTCAATTTACAGACCAGGCCAT
TTTACCAAGTACACCTGATACCGATGATTCCAAAACTGACGAAGTGATTC
CCAATACCGATCAAGATCCAAGTTTTTATCTCCCAAGTGCCGATTCTTTG
TTCAAGGACATACTGGGACCGAATTCGCCATCCTTAGAGGTGAAATTGCC
AGAAGAATCACTTCAATTGCAACCAGCTGACATTGTCGAATGTTCAGCGA
ATGTGGCGGAAATCGTTGAAAATGAACACGAAACGGAAACGGAAACGGAA
ACTGATTAAAAGCTTTCTAGACCAT

BS20367.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32655-RA 993 CG32655-PA 1..993 17..1009 4965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG32655-RA 1250 CG32655-RA 149..1145 17..1013 4985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 12235188..12235729 558..17 2695 99.8 Minus
X 23542271 X 12234667..12235126 1013..554 2300 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:34:44 has no hits.

BS20367.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:17 Download gff for BS20367.complete
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 1..991 17..1007 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:56 Download gff for BS20367.complete
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 149..1139 17..1007 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:34 Download gff for BS20367.complete
Subject Subject Range Query Range Percent Splice Strand
CG32655-RA 149..1139 17..1007 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:34 Download gff for BS20367.complete
Subject Subject Range Query Range Percent Splice Strand
X 12234673..12235125 555..1007 100 <- Minus
X 12235192..12235729 17..554 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:56 Download gff for BS20367.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 12128706..12129158 555..1007 100 <- Minus
arm_X 12129225..12129762 17..554 100   Minus

BS20367.pep Sequence

Translation from 16 to 1008

> BS20367.pep
MAEKKSQDNKDNVSGSQNRTSRVEAHVRQQEENNAIFARLFASLDAEHRK
LKELEERRSQLIEEMKNLRSLLFVENKKLRQTVAPISGGNPLPIPATSAS
SVVKKSSEKPSGSRTSPIIKSARLERRPSNKSVTIADPPTQSLTTSERPK
ASSSQGLKKKENRRSLVVPARKNKHRITLDNLSNTREDMLDEFDESALAT
SVGSNLQTLEQRRSNLEEREDIDEVLVSLSALFTFVDSQFTDQAILPSTP
DTDDSKTDEVIPNTDQDPSFYLPSADSLFKDILGPNSPSLEVKLPEESLQ
LQPADIVECSANVAEIVENEHETETETETD*

BS20367.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG32655-PA 330 CG32655-PA 1..330 1..330 1637 100 Plus