Clone BS20368 Report

Search the DGRC for BS20368

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:203
Well:68
Vector:pDNR-Dual
Associated Gene/TranscriptCG34137-RA
Protein status:BS20368.pep: full length peptide match
Sequenced Size:773

Clone Sequence Records

BS20368.complete Sequence

773 bp assembled on 2011-01-07

GenBank Submission: KX803149

> BS20368.complete
GAAGTTATCAGTCGACATGTCAGCATTCACCTGCACACAGTACCTAAACC
TCAATTCGAAGGACGTTTCGTCAATGTCCACCACCGTTACATTAAACGCA
GCCTGCTTTGGGCGGCAGGACTTGAACCTATTTATTGAGAGTCTAGAAAC
CATATCTCGCCTGGAAAGGGAGAGACACGAGCGACGCCAGCTTCGGCGCG
AGCAAAGACTACACCAGGCGCGAATTACTGAGTTGGCGGACGAACGATGC
TCCAGTCCGACACCCACAGCCGAGGAAGCCGTAGACGAGCCGCTCTTATA
TCTGGAGGCCAAGTGCATACCGTATGCGGTTTCTGGCCATATTTTTGCAC
AGGGCGACAACACACCTTGTCCCGAATACCATATGTGTGACGACGAAGCG
TACGGAAGTGCTTCTTATTCAGCACGCAGCAGCGTCACCTACTGTAGCTG
TGGCGGAATCTCCAATCTGGATTCAGACAGCGGAGAATCCGAAGGGAAGA
TGAAACCGTTTGTGCATCCGAGCTCCCAGGCCAAACCAAAGAATAGGTAT
TCTTCAACGCGATCCCGCATAATTAACTTGATGTTAAAGAGAAATAGGGC
TAAGCCCGCTCTCATCGAGCATCTGCAGCGACAGGGACACGGTGACACGT
TATCCAGCGAGAACATCAGTCACCAGTTCCCACGGCTTACTTCTAGCCAA
AAAAGGTCGGCTGAGCATAGTTTTCTGGATAAGGCCCTTCGATATCTTAC
ATTATAAAAGCTTTCTAGACCAT

BS20368.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 741 CG34137-PB 1..741 17..757 3690 99.9 Plus
CG34137-RA 741 CG34137-PA 1..741 17..757 3690 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-RB 887 CG34137-RB 73..813 17..757 3690 99.9 Plus
CG34137-RA 892 CG34137-RA 78..818 17..757 3690 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22151826..22152566 17..757 3690 99.9 Plus
Blast to na_te.dros performed on 2014-11-26 15:34:52 has no hits.

BS20368.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:18 Download gff for BS20368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RB 72..810 17..755 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:58 Download gff for BS20368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..816 17..755 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:38 Download gff for BS20368.complete
Subject Subject Range Query Range Percent Splice Strand
CG34137-RA 78..816 17..755 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:38 Download gff for BS20368.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22151826..22152564 17..755 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:58 Download gff for BS20368.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22151826..22152564 17..755 99   Plus

BS20368.pep Sequence

Translation from 16 to 756

> BS20368.pep
MSAFTCTQYLNLNSKDVSSMSTTVTLNAACFGRQDLNLFIESLETISRLE
RERHERRQLRREQRLHQARITELADERCSSPTPTAEEAVDEPLLYLEAKC
IPYAVSGHIFAQGDNTPCPEYHMCDDEAYGSASYSARSSVTYCSCGGISN
LDSDSGESEGKMKPFVHPSSQAKPKNRYSSTRSRIINLMLKRNRAKPALI
EHLQRQGHGDTLSSENISHQFPRLTSSQKRSAEHSFLDKALRYLTL*

BS20368.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG34137-PB 246 CG34137-PB 1..246 1..246 1277 100 Plus
CG34137-PA 246 CG34137-PA 1..246 1..246 1277 100 Plus