BS20372.complete Sequence
455 bp assembled on 2011-01-07
GenBank Submission: KX806299
> BS20372.complete
GAAGTTATCAGTCGACATGAAGGCTTTCATCGTTCTGGTTGCCCTGGCCT
GTGCCGCCCCAGCTTTCGGTCGCACCATGGACCGTTGCTCCCTGGCCCGC
GAGATGTCCAACCTGGGCGTTCCTCGTGACCAATTGGCTCGTTGGGCCTG
TATTGCCGAGCACGAGTCCTCCTACCGCACCGGAGTGGTTGGTCCCGAGA
ACTACAACGGCTCCAACGACTACGGAATCTTCCAGATCAACGACTACTAC
TGGTGCGCTCCTCCCAGCGGTCGCTTCTCCTACAACGAATGCGGATTGAG
CTGCAACGCTCTCCTGACCGACGACATCACCCACTCCGTCCGTTGTGCCC
AGAAGGTCCTCAGCCAGCAGGGATGGTCCGCCTGGTCCACCTGGCACTAC
TGCAGCGGATGGTTGCCGTCCATCGATGACTGCTTCTAAAAGCTTTCTAG
ACCAT
BS20372.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:33:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-RA | 423 | CG9118-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
LysB-RB | 423 | CG1179-PB | 1..423 | 17..439 | 1875 | 96.2 | Plus |
LysB-RA | 423 | CG1179-PA | 1..423 | 17..439 | 1875 | 96.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:33:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-RA | 480 | CG9118-RA | 19..443 | 16..440 | 2125 | 100 | Plus |
LysB-RB | 611 | CG1179-RB | 22..447 | 15..440 | 1890 | 96.2 | Plus |
LysB-RA | 486 | CG1179-RA | 22..447 | 15..440 | 1890 | 96.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:33:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1210754..1211178 | 440..16 | 2125 | 100 | Minus |
3L | 28110227 | 3L | 1207392..1207817 | 15..440 | 1890 | 96.2 | Plus |
3L | 28110227 | 3L | 1212952..1213375 | 17..440 | 1820 | 95.3 | Plus |
3L | 28110227 | 3L | 1210484..1210726 | 16..258 | 1020 | 94.7 | Plus |
3L | 28110227 | 3L | 1227770..1228195 | 15..440 | 920 | 82.1 | Plus |
3L | 28110227 | 3L | 1218286..1218607 | 410..89 | 635 | 79.8 | Minus |
3L | 28110227 | 3L | 1194874..1195241 | 435..68 | 625 | 78 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:33:56 has no hits.
BS20372.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:14 Download gff for
BS20372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..440 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:43 Download gff for
BS20372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..440 | 17..437 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:20 Download gff for
BS20372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
LysD-RA | 20..440 | 17..437 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:20 Download gff for
BS20372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1210757..1211177 | 17..437 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:43 Download gff for
BS20372.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1210757..1211177 | 17..437 | 100 | | Minus |
BS20372.pep Sequence
Translation from 16 to 438
> BS20372.pep
MKAFIVLVALACAAPAFGRTMDRCSLAREMSNLGVPRDQLARWACIAEHE
SSYRTGVVGPENYNGSNDYGIFQINDYYWCAPPSGRFSYNECGLSCNALL
TDDITHSVRCAQKVLSQQGWSAWSTWHYCSGWLPSIDDCF*
BS20372.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
LysD-PA | 140 | CG9118-PA | 1..140 | 1..140 | 786 | 100 | Plus |
LysC-PA | 140 | CG9111-PA | 1..140 | 1..140 | 777 | 98.6 | Plus |
LysB-PB | 140 | CG1179-PB | 1..140 | 1..140 | 770 | 98.6 | Plus |
LysB-PA | 140 | CG1179-PA | 1..140 | 1..140 | 770 | 98.6 | Plus |
LysE-PA | 140 | CG1180-PA | 1..140 | 1..140 | 755 | 96.4 | Plus |