BS20377.complete Sequence
2543 bp assembled on 2011-01-28
GenBank Submission: KX803526
> BS20377.complete
GAAGTTATCAGTCGACATGCATCGCAGCATGGATCGCAGAAGGAGCAGAA
CCCCGAGGACTCTGCCAGTCTGCTGGATTCTGCTGTGCCTGGTGGCCTGG
ACTGTTGCAGATGACTGGTCTCTAAGTTGCGCCTCCAACTGCACCTGCAA
GTGGACCAATGGCAAGAAGTCGGCCATCTGCAGCTCCCTGCAGCTGACCA
CCATTCCGAACACCCTGAGCACAGAGCTGCAGGTGCTGGTGCTCAATGAC
AACCACATCCCGTACCTCAACCGGGAGGAGTTCTCCACTCTGGGCCTGTT
GAACTTGCAGCGAATTTACCTCAAGAAGTCCGAGGTGCAGTACATACACA
AGGAGTCGTTCCGCAATCTGAAGATACTGGTGGAGATCGACCTGTCGGAC
AATAAGCTGGAGATGCTCGACAAGGACACCTTCATGGGGAACGATCGCCT
GAGGATACTCTATTTGAATGGAAATCCCCTCAAGCGCCTAGCGGCTTATC
AGTTTCCTATTCTGCCCCATCTGCGCACCTTGGACATGCACGACTGCCTC
ATCTCCTACATTGATCCCATGTCCCTGGCCAATCTTAATCTGCTGGAGTT
CCTCAACCTAAAGAACAACCTGCTGGAGAGCCTGAGCGAGTACGTGTTCC
AGCACATGGCCAATCTGAAGACGCTCTCCCTGGAGGAGAATCCCTGGCAG
TGCAACTGCAAACTGCGAAAGTTCCGGGGCTGGTATGTGAACAGCCGCCT
GAGCTCCGTGAGTCTGGTATGCAAGGGCCCTCCGGCCCAGAAGGATCGCA
CATGGGATAGCGTGGACGACGAGCTCTTCGGCTGTCCGCCGCGCGTTGAG
ATCTTCAACAATGAAGAGGTGCAGAACATCGACATCGGAAGTAATACCAC
CTTTAGCTGCCTGGTGTACGGGGATCCCCTGCCGGAGGTGGCTTGGGAAC
TGAATGGAAAGATACTGGACAACGACAACGTGCTCTTCGAATCGGAGAGC
ATCGCCTCGGATAAGCTGTGGAGTAATCTAACCGTTTTCAACGTGACCAG
CTTGGATGCTGGAACCTACGCCTGCACGGGCTCTAATTCCATCGGCAGTA
TGACGCAGAACATCAGTATCTACCTCAGCGAGATCGTTCAGCATGTGCTG
GAGAAAACTCCGGAGACCTTCTGGTACTTTGGCCTCATCATGGGCATCTT
CGGAACCGTCTTTCTGCTGATCTCCATCTCGTTTGTGGTCTGTCTCTGCA
AACGCACTACCCGCCAGCACCGTCATGCCAACAAGGCCGGCGTGAAGTCG
AGTGTTAGCTTCAATGATCAGGAAAAGAAACTTCTCGACTCAAGCGTCAC
CACGACCACCAATGATCGCGGTGACAGCTATGGCATCGACAACCAGCCCA
CTTCCATCGGTATGAACAAGGGGGACTCGGCCGGAATGGGCTTCAACCAA
ATAGAGATCCATGCGGTGGAGAGTCATCGGCATGGAAGCATGTTGGTGCA
GCAGCAGCCGCAACAGCAACAGGTTGCAGGTGGTGGTGGAATGCGGCAAC
AGCTGATGCAGGTCAAAGATTCCACCTGCGGCATGATGAGTGTGCCCACC
TCAATGGCAGGCCATGCCCATTCGCATCCTGCCCAGATCTCTGAGGAGTT
CCCGCTGAACGTGGGCGTCTTTCCACCGCCACCAGAGTTTTGTTCGAACA
TAGTCCCGAATCCAGCGTTTGGGGGCAACATTTTCATCCGGGTATCCGTC
ACACAGGACATGCTGGATGGTGCGGACCTGAACATGTATCCAGATCTGCT
GAACATTCCGAAGAGGATGCAGGACGTACAGGAGAGTGGTGCTGGTGCAG
TTGCCGTGCCCGAGGGTCAGTTTGCCACTCTGCCGAGACACACAGCCCGG
AGAGGTATTCTCAAGAAGGACACCTCCTTGCAGCAACAGCAGCAGCAGCA
CCAGCAGCAGCATCAACATCAACAGCAGCAGCAGCAACAGCAGATACAGC
AGCAGCAGCACCAGCAGCTGCAACAGCAACACCAGCCATCCGGACTCTAC
ACACATGATGAAATCGTGACCTACAACCTGGAGGCCAGTGGCTACGACCC
CCACCAGTCGGGGTACCACAGCAATGCCATGGAGCTGCCTCCTCCGCCGC
CGCCGCCCGCCGTAACAGCGGTGGTGCAGTGTCATCACCCGAGTCCCAAC
AACTGCGCCAGCTGCATCAACAATGCGCCGCCACCGCCCTCCGCCTGCCA
ATCGCCGCCCGTCGAGGTGACGCCCATGAGGCCGCTGGACAGCTCCGCCT
ACCCCAAGTACGACAACATGGGTCGGCGGATCACCGCAAGCGGAGGACTA
GGTGGATCCAATCTTTCGCTGCACGACGAGGAGCGCTACGAAAATGAGAC
GCTCTTTGGCCAGGCGGAGAGTCAGACCAAGGGAATGCCGGAGCAGTCAC
AGGATCTTCACCAGCCGCAGGAGGTGACTCAAGGCCAGGACAAGGGCGGC
GGTCCTGGCGAGTTCGTGTCGCTCTAGAAGCTTTCTAGACCAT
BS20377.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek6-RB | 2532 | CG1804-PB | 1..2511 | 17..2527 | 12555 | 100 | Plus |
| kek6-RA | 2511 | CG1804-PA | 1..2511 | 17..2527 | 12555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek6-RB | 6616 | CG1804-RB | 1069..3579 | 17..2527 | 12555 | 100 | Plus |
| kek6-RA | 6616 | CG1804-RA | 1069..3579 | 17..2527 | 12555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31659149..31661609 | 67..2527 | 12305 | 100 | Plus |
| 3R | 32079331 | 3R | 31658918..31658969 | 17..68 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:30:51 has no hits.
BS20377.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:58 Download gff for
BS20377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek6-RA | 1..2511 | 17..2527 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:50 Download gff for
BS20377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek6-RA | 1069..3579 | 17..2527 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:55 Download gff for
BS20377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek6-RA | 1069..3579 | 17..2527 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:55 Download gff for
BS20377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31658918..31658969 | 17..68 | 100 | -> | Plus |
| 3R | 31659151..31661609 | 69..2527 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:50 Download gff for
BS20377.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27484873..27487331 | 69..2527 | 100 | | Plus |
| arm_3R | 27484640..27484691 | 17..68 | 100 | -> | Plus |
BS20377.pep Sequence
Translation from 16 to 2526
> BS20377.pep
MHRSMDRRRSRTPRTLPVCWILLCLVAWTVADDWSLSCASNCTCKWTNGK
KSAICSSLQLTTIPNTLSTELQVLVLNDNHIPYLNREEFSTLGLLNLQRI
YLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTFMGNDRLRILYL
NGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLKN
NLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLSSVSL
VCKGPPAQKDRTWDSVDDELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLV
YGDPLPEVAWELNGKILDNDNVLFESESIASDKLWSNLTVFNVTSLDAGT
YACTGSNSIGSMTQNISIYLSEIVQHVLEKTPETFWYFGLIMGIFGTVFL
LISISFVVCLCKRTTRQHRHANKAGVKSSVSFNDQEKKLLDSSVTTTTND
RGDSYGIDNQPTSIGMNKGDSAGMGFNQIEIHAVESHRHGSMLVQQQPQQ
QQVAGGGGMRQQLMQVKDSTCGMMSVPTSMAGHAHSHPAQISEEFPLNVG
VFPPPPEFCSNIVPNPAFGGNIFIRVSVTQDMLDGADLNMYPDLLNIPKR
MQDVQESGAGAVAVPEGQFATLPRHTARRGILKKDTSLQQQQQQHQQQHQ
HQQQQQQQQIQQQQHQQLQQQHQPSGLYTHDEIVTYNLEASGYDPHQSGY
HSNAMELPPPPPPPAVTAVVQCHHPSPNNCASCINNAPPPPSACQSPPVE
VTPMRPLDSSAYPKYDNMGRRITASGGLGGSNLSLHDEERYENETLFGQA
ESQTKGMPEQSQDLHQPQEVTQGQDKGGGPGEFVSL*
BS20377.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek6-PB | 843 | CG1804-PB | 1..836 | 1..836 | 4452 | 100 | Plus |
| kek6-PA | 836 | CG1804-PA | 1..836 | 1..836 | 4452 | 100 | Plus |
| kek4-PC | 649 | CG9431-PC | 27..427 | 23..411 | 518 | 31.9 | Plus |
| kek4-PB | 649 | CG9431-PB | 27..427 | 23..411 | 518 | 31.9 | Plus |
| kek4-PA | 649 | CG9431-PA | 27..427 | 23..411 | 518 | 31.9 | Plus |
