BS20379.complete Sequence
515 bp assembled on 2011-01-07
GenBank Submission: KX802540
> BS20379.complete
GAAGTTATCAGTCGACATGGCCTGTCGCTGCAAATATCTGAAGCAGATCT
TTACCAAGTGCTGCTACTGCTATTCCCTGCGTTTCGGTGTGCTGCTCTTC
GGATGCATTTTTCTAACCTGGTTCATTTACATCACCATCGGCACCGGCTT
CATGATGGAGTGCATCTTTCCGAACGAGTATCAGAGGTCCCTTATCCCAG
CACCGGCGGCCCTCAAGGCCACCATGGTCTTCTCCTTCTTCGGCATCATA
GTTTCGGCCATGCTCTGCCTGGGAGTGCACAATAACAACGAGATGCTCTT
CCTGCCATTTTTGGTTTTCACACCCATTTGGATAATTGTGCACATTTTTG
CCCTGACCGTTTACAGCTTTAATACCATCATCATCATCCTGACTGTCATC
ACAATGTTACTTTTAGTGTATGCCTGGCTGGTGGTTTGGTCCTACTACAT
AGAACTGCTCTTCGCCTACGAAGATGAACTGGAAACCGGTTATGTGTAAA
AGCTTTCTAGACCAT
BS20379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-RA | 483 | CG42288-PA | 1..483 | 17..499 | 2415 | 100 | Plus |
| CG42288-RB | 474 | CG42288-PB | 1..474 | 17..499 | 2245 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-RA | 648 | CG42288-RA | 78..561 | 16..499 | 2420 | 100 | Plus |
| CG42288-RB | 639 | CG42288-RB | 78..552 | 16..499 | 2250 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14091108..14091375 | 16..283 | 1340 | 100 | Plus |
| 2R | 25286936 | 2R | 14091448..14091571 | 284..407 | 620 | 100 | Plus |
| 2R | 25286936 | 2R | 14091636..14091727 | 408..499 | 460 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:36:03 has no hits.
BS20379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:22 Download gff for
BS20379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..559 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:13 Download gff for
BS20379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..559 | 17..497 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:07 Download gff for
BS20379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42288-RA | 79..559 | 17..497 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:07 Download gff for
BS20379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14091109..14091375 | 17..283 | 100 | -> | Plus |
| 2R | 14091448..14091571 | 284..407 | 100 | -> | Plus |
| 2R | 14091636..14091725 | 408..497 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:13 Download gff for
BS20379.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9978614..9978880 | 17..283 | 100 | -> | Plus |
| arm_2R | 9978953..9979076 | 284..407 | 100 | -> | Plus |
| arm_2R | 9979141..9979230 | 408..497 | 100 | | Plus |
BS20379.pep Sequence
Translation from 16 to 498
> BS20379.pep
MACRCKYLKQIFTKCCYCYSLRFGVLLFGCIFLTWFIYITIGTGFMMECI
FPNEYQRSLIPAPAALKATMVFSFFGIIVSAMLCLGVHNNNEMLFLPFLV
FTPIWIIVHIFALTVYSFNTIIIILTVITMLLLVYAWLVVWSYYIELLFA
YEDELETGYV*
BS20379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42288-PA | 160 | CG42288-PA | 1..160 | 1..160 | 856 | 100 | Plus |
| CG42288-PB | 157 | CG42288-PB | 1..157 | 1..160 | 830 | 98.1 | Plus |
