BS20381.complete Sequence
503 bp assembled on 2011-01-07
GenBank Submission: KX806280
> BS20381.complete
GAAGTTATCAGTCGACATGCATAATTTTCAACTGACCGTCGTTTTCCTGG
CACTGTTCACTTTTACCAGTTCCTTTGGATACCGTTCTGAACATCCGCAC
AGAAAACCAATACATAGCAACCGTCCATCTCCAACTACTACAATGACAAC
AGATTCAACTTCAACTAGCTTTATGACAACAGATTCAACCCCAAGTGAAA
CGGAATCCACTTCGGATACATCTACTGAAGAAAGTACACAGATTTCTGAC
TTCACCGAAAGTTCAACCGAAAGTTCGACGACAGCAAAGATATTTTTAAA
GGACAATGAGATTTCAAAACCAGAAAACAGCAACACTTTACTTATCAGTG
TGTATGGCATTGTAATTACCTTGGCTATTTTAGTTGCTCTAATATACTGC
ATTCGACGCCATTATGGTTCATATTCTGTGAAAGAGCAATGCAAGCCCAT
TGAAAGTACCGCATATTTTAATAATATTAAATATTAAAAGCTTTCTAGAC
CAT
BS20381.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-RC | 471 | CG31770-PC | 1..471 | 17..487 | 2355 | 100 | Plus |
He-RB | 471 | CG31770-PB | 1..471 | 17..487 | 2355 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-RC | 553 | CG31770-RC | 59..531 | 17..489 | 2365 | 100 | Plus |
He-RB | 673 | CG31770-RB | 59..531 | 17..489 | 2365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 13972238..13972611 | 489..116 | 1870 | 100 | Minus |
2L | 23513712 | 2L | 13972791..13972889 | 115..17 | 495 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:36:22 has no hits.
BS20381.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:24 Download gff for
BS20381.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 59..527 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:18 Download gff for
BS20381.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 59..527 | 17..485 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:14 Download gff for
BS20381.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
He-RB | 59..527 | 17..485 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:14 Download gff for
BS20381.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 13972242..13972611 | 116..485 | 100 | <- | Minus |
2L | 13972791..13972889 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:18 Download gff for
BS20381.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 13972242..13972611 | 116..485 | 100 | <- | Minus |
arm_2L | 13972791..13972889 | 17..115 | 100 | | Minus |
BS20381.pep Sequence
Translation from 16 to 486
> BS20381.pep
MHNFQLTVVFLALFTFTSSFGYRSEHPHRKPIHSNRPSPTTTMTTDSTST
SFMTTDSTPSETESTSDTSTEESTQISDFTESSTESSTTAKIFLKDNEIS
KPENSNTLLISVYGIVITLAILVALIYCIRRHYGSYSVKEQCKPIESTAY
FNNIKY*
BS20381.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:53:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
He-PC | 156 | CG31770-PC | 1..156 | 1..156 | 798 | 100 | Plus |
He-PB | 156 | CG31770-PB | 1..156 | 1..156 | 798 | 100 | Plus |