BS20382.complete Sequence
479 bp assembled on 2011-01-07
GenBank Submission: KX806026
> BS20382.complete
GAAGTTATCAGTCGACATGGCAGTCGGCTTCATTGTAATCTTCAGCGCCA
TATTCGTCCTGGCCCAAGGATCAAATCTTTTGCCCATTGAGCAGCAATCG
GAGGTGCCAATCCATTCTGGTGCTCCAGCGGCAGTCATTTCGCAAGGACA
ACAGTCTGTGTCCCAGTCCGTTGGTTCTGCTTACGGTCAAGACCAAGGGT
TGGCTGGTGCACGACCCTATTGGGCTGCACCTCGTCCTGCTCTGGCTGCA
CCTCGTCCTGCTGAGTCCTACGCTCGTCCTGCTGTGGCTGTACCTCGTCC
TTCTGTGGCTGCACCTCGTCCGGCTGTGTCCTACGCTCGTCCTGCAGCCG
TGGTGGTTCCTGCTTTGGTGGTTGCTCCTATTCGCCAGCCTCAGGGAGTC
CCTGTCCCAGCCGTTGTAGGAGCTAGTCAAGGAAATGTGTACCATGGTCG
CCATCATGGCTAAAAGCTTTCTAGACCAT
BS20382.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33333-RA | 447 | CG33333-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
CG33333-RA | 447 | CG33333-PA | 207..266 | 286..345 | 225 | 91.7 | Plus |
CG33333-RA | 447 | CG33333-PA | 270..329 | 223..282 | 225 | 91.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33333-RA | 576 | CG33333-RA | 18..464 | 17..463 | 2235 | 100 | Plus |
CG33333-RA | 576 | CG33333-RA | 224..283 | 286..345 | 225 | 91.7 | Plus |
CG33333-RA | 576 | CG33333-RA | 287..346 | 223..282 | 225 | 91.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17417484..17417930 | 17..463 | 2235 | 100 | Plus |
3R | 32079331 | 3R | 17417690..17417749 | 286..345 | 225 | 91.7 | Plus |
3R | 32079331 | 3R | 17417753..17417812 | 223..282 | 225 | 91.7 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:35:06 has no hits.
BS20382.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:19 Download gff for
BS20382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 18..462 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:01 Download gff for
BS20382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 18..462 | 17..461 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:43 Download gff for
BS20382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33333-RA | 18..462 | 17..461 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:43 Download gff for
BS20382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17417484..17417928 | 17..461 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:01 Download gff for
BS20382.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 13243206..13243650 | 17..461 | 100 | | Plus |
BS20382.pep Sequence
Translation from 16 to 462
> BS20382.pep
MAVGFIVIFSAIFVLAQGSNLLPIEQQSEVPIHSGAPAAVISQGQQSVSQ
SVGSAYGQDQGLAGARPYWAAPRPALAAPRPAESYARPAVAVPRPSVAAP
RPAVSYARPAAVVVPALVVAPIRQPQGVPVPAVVGASQGNVYHGRHHG*
BS20382.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33333-PA | 148 | CG33333-PA | 1..148 | 1..148 | 750 | 100 | Plus |
CG42834-PA | 122 | CG42834-PA | 1..103 | 1..88 | 139 | 36.1 | Plus |