BS20384.complete Sequence
611 bp assembled on 2011-01-07
GenBank Submission: KX800480
> BS20384.complete
GAAGTTATCAGTCGACATGAAGTGCCTCCTGGTGACGATAGCCTGTTTGA
TCACGTGCTCCAGTGTGGGTGCCCTCGTGCACTATATGAAACTGGAAAAA
GGAAAGAACGGATGCAAATCGCCCAAGGGTACAGAGATGGCTGTGGGTGC
TGTTGAGCAGGATGAAAAGACTTGTGGAGCTCTTACTTGTCAAAATACGG
AAGGGGATGCCTTCATCCACTACTGTCAGATACCTGCCTCTTTTGCGGAA
TGTGTGGAGACCGCTGTTCTGACGGACGTTGACTTTCCACAATGCTGTTG
GACTTGTGCCGATTGGGCGGACTGCGATGGAGAAGAACCTGGACCAGGGG
ATGAAGCTCCTGCTGCCGACGGAGCTGCTGACGCACCACCTCCTGCTGCA
AGAACCCATGCAAGAAATTCTAAGTACCAGGCAACTACAACTGATACTAC
AGAAAGTGAAAGGCCACGCAGCAAAGGAAAATGGGGTTCCAAGAGGAGCA
CTACCACATCCGATGAATCCGAATTTCCCGAGGGAATCAATATAAGGTTT
GGCGGTGGAACACCGATCTCCAAGTTTGGCGAAGACAGCATTTAAAAGCT
TTCTAGACCAT
BS20384.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34460-RA | 579 | CG34460-PA | 1..579 | 17..595 | 2895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34460-RA | 714 | CG34460-RA | 27..605 | 17..595 | 2895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16827274..16827646 | 223..595 | 1865 | 100 | Plus |
2R | 25286936 | 2R | 16827042..16827159 | 105..222 | 590 | 100 | Plus |
2R | 25286936 | 2R | 16826898..16826985 | 17..104 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:35:14 has no hits.
BS20384.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:19 Download gff for
BS20384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34460-RA | 2..578 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:03 Download gff for
BS20384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34460-RA | 27..603 | 17..593 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:47 Download gff for
BS20384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34460-RA | 27..603 | 17..593 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:47 Download gff for
BS20384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16826898..16826985 | 17..104 | 100 | -> | Plus |
2R | 16827042..16827159 | 105..222 | 100 | -> | Plus |
2R | 16827274..16827644 | 223..593 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:03 Download gff for
BS20384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12714403..12714490 | 17..104 | 100 | -> | Plus |
arm_2R | 12714547..12714664 | 105..222 | 100 | -> | Plus |
arm_2R | 12714779..12715149 | 223..593 | 100 | | Plus |
BS20384.pep Sequence
Translation from 16 to 594
> BS20384.pep
MKCLLVTIACLITCSSVGALVHYMKLEKGKNGCKSPKGTEMAVGAVEQDE
KTCGALTCQNTEGDAFIHYCQIPASFAECVETAVLTDVDFPQCCWTCADW
ADCDGEEPGPGDEAPAADGAADAPPPAARTHARNSKYQATTTDTTESERP
RSKGKWGSKRSTTTSDESEFPEGINIRFGGGTPISKFGEDSI*
BS20384.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34460-PA | 192 | CG34460-PA | 1..192 | 1..192 | 1049 | 100 | Plus |