Clone BS20384 Report

Search the DGRC for BS20384

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:203
Well:84
Vector:pDNR-Dual
Associated Gene/TranscriptCG34460-RA
Protein status:BS20384.pep: gold
Sequenced Size:611

Clone Sequence Records

BS20384.complete Sequence

611 bp assembled on 2011-01-07

GenBank Submission: KX800480

> BS20384.complete
GAAGTTATCAGTCGACATGAAGTGCCTCCTGGTGACGATAGCCTGTTTGA
TCACGTGCTCCAGTGTGGGTGCCCTCGTGCACTATATGAAACTGGAAAAA
GGAAAGAACGGATGCAAATCGCCCAAGGGTACAGAGATGGCTGTGGGTGC
TGTTGAGCAGGATGAAAAGACTTGTGGAGCTCTTACTTGTCAAAATACGG
AAGGGGATGCCTTCATCCACTACTGTCAGATACCTGCCTCTTTTGCGGAA
TGTGTGGAGACCGCTGTTCTGACGGACGTTGACTTTCCACAATGCTGTTG
GACTTGTGCCGATTGGGCGGACTGCGATGGAGAAGAACCTGGACCAGGGG
ATGAAGCTCCTGCTGCCGACGGAGCTGCTGACGCACCACCTCCTGCTGCA
AGAACCCATGCAAGAAATTCTAAGTACCAGGCAACTACAACTGATACTAC
AGAAAGTGAAAGGCCACGCAGCAAAGGAAAATGGGGTTCCAAGAGGAGCA
CTACCACATCCGATGAATCCGAATTTCCCGAGGGAATCAATATAAGGTTT
GGCGGTGGAACACCGATCTCCAAGTTTGGCGAAGACAGCATTTAAAAGCT
TTCTAGACCAT

BS20384.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG34460-RA 579 CG34460-PA 1..579 17..595 2895 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG34460-RA 714 CG34460-RA 27..605 17..595 2895 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:35:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16827274..16827646 223..595 1865 100 Plus
2R 25286936 2R 16827042..16827159 105..222 590 100 Plus
2R 25286936 2R 16826898..16826985 17..104 440 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:35:14 has no hits.

BS20384.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:19 Download gff for BS20384.complete
Subject Subject Range Query Range Percent Splice Strand
CG34460-RA 2..578 17..593 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:03 Download gff for BS20384.complete
Subject Subject Range Query Range Percent Splice Strand
CG34460-RA 27..603 17..593 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:44:47 Download gff for BS20384.complete
Subject Subject Range Query Range Percent Splice Strand
CG34460-RA 27..603 17..593 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:44:47 Download gff for BS20384.complete
Subject Subject Range Query Range Percent Splice Strand
2R 16826898..16826985 17..104 100 -> Plus
2R 16827042..16827159 105..222 100 -> Plus
2R 16827274..16827644 223..593 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:03 Download gff for BS20384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12714403..12714490 17..104 100 -> Plus
arm_2R 12714547..12714664 105..222 100 -> Plus
arm_2R 12714779..12715149 223..593 100   Plus

BS20384.pep Sequence

Translation from 16 to 594

> BS20384.pep
MKCLLVTIACLITCSSVGALVHYMKLEKGKNGCKSPKGTEMAVGAVEQDE
KTCGALTCQNTEGDAFIHYCQIPASFAECVETAVLTDVDFPQCCWTCADW
ADCDGEEPGPGDEAPAADGAADAPPPAARTHARNSKYQATTTDTTESERP
RSKGKWGSKRSTTTSDESEFPEGINIRFGGGTPISKFGEDSI*

BS20384.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:52:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG34460-PA 192 CG34460-PA 1..192 1..192 1049 100 Plus