BS20390.complete Sequence
269 bp assembled on 2011-01-07
GenBank Submission: KX802929
> BS20390.complete
GAAGTTATCAGTCGACATGCGTTTATATAAAATATTTTGCCTAATTTGTT
CCATATTTGGCTGTGTTTCAGCTTTAAAAGATCCGAGCTGTGCTGTTGAG
TTGTTTGGCCAAGGTGCTTGCAACACTTTGATTACTCGAATCGGCTATTT
ACGTTGGGAAAACATGTGTACATCAAAGAACTTTGTTGCATGCGACACCG
ATGGAACTTCATTTGAGAGCATTAAGGAATGCGAAGATAAATGCAAAGAG
TAGAAGCTTTCTAGACCAT
BS20390.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-RA | 237 | CG42459-PA | 1..237 | 17..253 | 1185 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-RA | 322 | CG42459-RA | 36..272 | 17..253 | 1185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3387404..3387573 | 253..84 | 850 | 100 | Minus |
2L | 23513712 | 2L | 3387642..3387708 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:36:58 has no hits.
BS20390.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:09:26 Download gff for
BS20390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..272 | 17..253 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:40:27 Download gff for
BS20390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..272 | 17..253 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:45:30 Download gff for
BS20390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp23F-RA | 36..272 | 17..253 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:45:30 Download gff for
BS20390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3387404..3387573 | 84..253 | 100 | <- | Minus |
2L | 3387642..3387708 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:40:27 Download gff for
BS20390.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3387404..3387573 | 84..253 | 100 | <- | Minus |
arm_2L | 3387642..3387708 | 17..83 | 100 | | Minus |
BS20390.pep Sequence
Translation from 16 to 252
> BS20390.pep
MRLYKIFCLICSIFGCVSALKDPSCAVELFGQGACNTLITRIGYLRWENM
CTSKNFVACDTDGTSFESIKECEDKCKE*
BS20390.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:53:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp23F-PA | 78 | CG42459-PA | 1..78 | 1..78 | 430 | 100 | Plus |
CG42460-PB | 79 | CG42460-PB | 1..78 | 1..78 | 212 | 52.6 | Plus |
CG42460-PA | 79 | CG42460-PA | 1..78 | 1..78 | 212 | 52.6 | Plus |