BS20453.complete Sequence
620 bp assembled on 2011-01-07
GenBank Submission: KX801703
> BS20453.complete
GAAGTTATCAGTCGACATGAATGTGGACAAAGCCAGAGACGAGATGATTG
AGATGTCCGAGCAGGTGTGGAAGGATGCGGAGCAGTGGCAAAGAGGTATC
CACAATGGTCAGGCGGTCATGAAGCAGATCAAGGCCATAAATCTTAAGCT
CTTCAGCACCGAGAATAGGCTGAACAACGCGGACTCGCGTAAGGAGCTCC
AGGCCACAGGGAAACGGATCAACCACTTGTACCAATGCCTCCAACGACCT
CTCGCCACGATAGGCAACATTTTAAGGACCCTGACCGGTATCAGGGACAA
CACTGCCAGGATGTTGAGCCGCTTGACCATATTCTTGGACGATGAAACAC
TGGCGAAGCACAGAATACGGCCCAAGCTCGAGAGTTCCAAGCTTCTGAAG
ATGCTGCAGTTCCTAAGCCACCGTTACGATACCGAATGGGAGGTCAAGGA
AATGGTCGTGAACGAATTGGAGAGAATCAGCAACTCCTATGATCTGGATC
TTGCAATGGCGTGCTGGAGCACTTGCAGTCACGCAGGAGGTCCAGAGTTC
GCAAAGATGATGCGCGAGTATTACTGGATCATTGATCGCCGGCAACCTTT
TTAGAAGCTTTCTAGACCAT
BS20453.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-RA | 588 | CG12984-PA | 1..588 | 17..604 | 2940 | 100 | Plus |
| CG12984-RB | 99 | CG12984-PB | 1..99 | 506..604 | 495 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-RA | 824 | CG12984-RA | 42..631 | 15..604 | 2950 | 100 | Plus |
| CG12984-RB | 421 | CG12984-RB | 86..228 | 462..604 | 715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20991714..20992160 | 15..461 | 2235 | 100 | Plus |
| 3L | 28110227 | 3L | 20992595..20992737 | 462..604 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:19:13 has no hits.
BS20453.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:20 Download gff for
BS20453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 44..631 | 17..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:40 Download gff for
BS20453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 44..631 | 17..604 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:49 Download gff for
BS20453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12984-RA | 44..631 | 17..604 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:49 Download gff for
BS20453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20991716..20992160 | 17..461 | 100 | -> | Plus |
| 3L | 20992595..20992737 | 462..604 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:40 Download gff for
BS20453.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20984816..20985260 | 17..461 | 100 | -> | Plus |
| arm_3L | 20985695..20985837 | 462..604 | 100 | | Plus |
BS20453.pep Sequence
Translation from 16 to 603
> BS20453.pep
MNVDKARDEMIEMSEQVWKDAEQWQRGIHNGQAVMKQIKAINLKLFSTEN
RLNNADSRKELQATGKRINHLYQCLQRPLATIGNILRTLTGIRDNTARML
SRLTIFLDDETLAKHRIRPKLESSKLLKMLQFLSHRYDTEWEVKEMVVNE
LERISNSYDLDLAMACWSTCSHAGGPEFAKMMREYYWIIDRRQPF*
BS20453.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12984-PA | 195 | CG12984-PA | 1..195 | 1..195 | 1020 | 100 | Plus |
| CG12984-PB | 32 | CG12984-PB | 1..32 | 164..195 | 189 | 100 | Plus |
