BS20470.complete Sequence
287 bp assembled on 2011-01-07
GenBank Submission: KX801357
> BS20470.complete
GAAGTTATCAGTCGACATGTTAAATTTAAAACACTTTGCCAGCCACGCCT
ACCGCCAGTACGAACTGGTGACGTGCGTGAACATGCTGGAGCCCTGGGAA
AAGAAGCTGATCAATGGATTCTTTCTGGTGATGCTGCTCCTGGTGCTCTT
CTCCAGCTTCATGTATCTTCCCAACTACATGCAAACCCTAATGCAATTTG
TAACGCCGCCCAACTGGCACAATTCCCCGGATAGCGCAGCCTATGTGGCA
CAAAAGATCGCACGGAGCTGAAAGCTTTCTAGACCAT
BS20470.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34293-RB | 255 | CG34293-PB | 1..255 | 17..271 | 1275 | 100 | Plus |
CG34293-RA | 255 | CG34293-PA | 1..255 | 17..271 | 1275 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34293-RB | 740 | CG34293-RB | 48..302 | 17..271 | 1275 | 100 | Plus |
CG34293-RA | 446 | CG34293-RA | 48..302 | 17..271 | 1275 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 27165213..27165370 | 271..114 | 790 | 100 | Minus |
3R | 32079331 | 3R | 27165432..27165528 | 113..17 | 485 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:19:24 has no hits.
BS20470.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:21 Download gff for
BS20470.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 53..301 | 22..270 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:42 Download gff for
BS20470.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 53..301 | 22..270 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:53 Download gff for
BS20470.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34293-RA | 53..301 | 22..270 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:53 Download gff for
BS20470.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 27165214..27165370 | 114..270 | 100 | <- | Minus |
3R | 27165432..27165523 | 22..113 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:42 Download gff for
BS20470.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22991154..22991245 | 22..113 | 100 | | Minus |
arm_3R | 22990936..22991092 | 114..270 | 100 | <- | Minus |
BS20470.pep Sequence
Translation from 16 to 270
> BS20470.pep
MLNLKHFASHAYRQYELVTCVNMLEPWEKKLINGFFLVMLLLVLFSSFMY
LPNYMQTLMQFVTPPNWHNSPDSAAYVAQKIARS*
BS20470.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34293-PB | 84 | CG34293-PB | 1..84 | 1..84 | 447 | 100 | Plus |
CG34293-PA | 84 | CG34293-PA | 1..84 | 1..84 | 447 | 100 | Plus |