BS20494.complete Sequence
755 bp assembled on 2011-01-07
GenBank Submission: KX803846
> BS20494.complete
GAAGTTATCAGTCGACATGCTATCGCTGCTAGACCAGCCGTCCGCATCGC
GAGGGTGGGATTCAACCATGTCAAAGCCAGCTCTGTATTATGCCACCCTA
AGTCCCCCATCGCGCGCCGTCCTCCTCACGGCTAAGGCGATCGGACTCGA
CCTTGAACTACGGCCAATTAACCTGCTGAAGGGAGAGCATCTGACTCCGG
AATTCCTCAAGCTGAACCCCCAGCACACCATCCCGACCCTGATCGACGGC
GAGGCCACTATCATTGACTCGCACGCCATCTGCGCCTACCTGGTGGAGAA
GTATGGCCAGAAGGAGCAGCAGCTCTATCCGAAGGAATTGGTGCAGCGCG
CCAACGTGGATGCTCGGCTCCATCTGGACTCCGGCCACCTCTTCGCGCGC
CTGCGCTTCCTTTACGAGCCCATCCTGTATTATGGATCGACGGACTGCTC
CATCGACAAGATCGCATACATCCAGAAGTGCTGGGAGATCCTAGAGGGAT
TCCTCAAGGATCAGCCGTATTTGTGTGGTTCTGATCTAACCATCGCAGAC
TTTTGCGCCGTGGCCACCGTAACCTCGGTGAACGACACCGCTCCCATCGA
TGAATTTAAGTTTCCCAAGATGCACGCCTGGCTGAAGCGTCTGGCAGAGC
TACCCTACTACCAGGAGGTAAACGGCGACGGCGCTGACGAGCTTAAGAGC
ATCTTCAAGGCCAAGCTGGCAGAAAACCGTGGCAAGTAGAAGCTTTCTAG
ACCAT
BS20494.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:19:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 672 | CG16936-PC | 1..672 | 68..739 | 3360 | 100 | Plus |
GstE12-RB | 672 | CG16936-PB | 1..672 | 68..739 | 3360 | 100 | Plus |
GstE12-RD | 672 | CG16936-PD | 1..672 | 68..739 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:19:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-RC | 1311 | CG16936-RC | 492..1214 | 17..739 | 3615 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 130..810 | 59..739 | 3405 | 100 | Plus |
GstE12-RB | 1022 | CG16936-RB | 220..899 | 60..739 | 3400 | 100 | Plus |
GstE12-RD | 907 | CG16936-RD | 27..69 | 17..59 | 215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24766841..24767418 | 739..162 | 2890 | 100 | Minus |
2R | 25286936 | 2R | 24767474..24767578 | 163..59 | 525 | 100 | Minus |
2R | 25286936 | 2R | 24767639..24767681 | 59..17 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:19:41 has no hits.
BS20494.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-07 15:08:22 Download gff for
BS20494.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG16936-RA | 78..757 | 60..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:45 Download gff for
BS20494.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RC | 494..1216 | 17..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:38:58 Download gff for
BS20494.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE12-RC | 492..1214 | 17..739 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:38:58 Download gff for
BS20494.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24767639..24767681 | 17..59 | 100 | | Minus |
2R | 24766841..24767417 | 163..739 | 100 | <- | Minus |
2R | 24767475..24767577 | 60..162 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:45 Download gff for
BS20494.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20654364..20654940 | 163..739 | 100 | <- | Minus |
arm_2R | 20654998..20655100 | 60..162 | 100 | <- | Minus |
arm_2R | 20655162..20655204 | 17..59 | 100 | | Minus |
BS20494.pep Sequence
Translation from 16 to 738
> BS20494.pep
MLSLLDQPSASRGWDSTMSKPALYYATLSPPSRAVLLTAKAIGLDLELRP
INLLKGEHLTPEFLKLNPQHTIPTLIDGEATIIDSHAICAYLVEKYGQKE
QQLYPKELVQRANVDARLHLDSGHLFARLRFLYEPILYYGSTDCSIDKIA
YIQKCWEILEGFLKDQPYLCGSDLTIADFCAVATVTSVNDTAPIDEFKFP
KMHAWLKRLAELPYYQEVNGDGADELKSIFKAKLAENRGK*
BS20494.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:49:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE12-PC | 223 | CG16936-PC | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PB | 223 | CG16936-PB | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PD | 223 | CG16936-PD | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE12-PA | 223 | CG16936-PA | 1..223 | 18..240 | 1169 | 100 | Plus |
GstE11-PB | 225 | CG5224-PB | 3..225 | 19..240 | 566 | 49.3 | Plus |