BS20509.complete Sequence
497 bp assembled on 2011-01-11
GenBank Submission: KX806284
> BS20509.complete
GAAGTTATCAGTCGACATGAAGAGCCTGACGTTATTGGCGCTTTTGATCT
TGGCCACGTTGGCCTTTGTCCACGGTGGCAAGGTGACCATCAACGGCAAG
TGCGTAAACTGCTCCCATGATCAAACGACTACCACCACGCACAAGCCAAC
AAGTGGAAAAGGAAGTGGAGGTAGGACGACAGCCCGGCCAAGCTCGAGAT
CATCTCCAGCCCGCGGTCGCCCATCATGGGATGACGATGATGATGATGAC
CTGACCGGTGACTGGGCACTGCATCAATCGGCTGGAGGAACTCAATACAT
TGGCAGGCGTTCGAAGCGTCAGTCACGCGGTGGTCAGTACATCGATTTGG
GCGGATCTGGCGGAAGGGGTGGAGGCGGAGGATGGGCAGGATCTGGCATA
ACCACCATCGATTCCAGTGGCTATCCCGGCGGAACACTGGTGCGCAATAG
TGATTGCGTCGGTTGCAATATTCGCGGATAAAAGCTTTCTAGACCAT
BS20509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15067-RB | 465 | CG15067-PB | 1..465 | 17..481 | 2325 | 100 | Plus |
| CG15067-RA | 465 | CG15067-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15067-RB | 505 | CG15067-RB | 19..484 | 17..482 | 2330 | 100 | Plus |
| CG15067-RA | 711 | CG15067-RA | 19..484 | 17..482 | 2330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18385051..18385459 | 482..74 | 2045 | 100 | Minus |
| 2R | 25286936 | 2R | 18385512..18385571 | 76..17 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:52:28 has no hits.
BS20509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:22 Download gff for
BS20509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RA | 18..480 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:42 Download gff for
BS20509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RA | 19..481 | 17..479 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:49 Download gff for
BS20509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RA | 19..481 | 17..479 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:49 Download gff for
BS20509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18385054..18385458 | 75..479 | 100 | <- | Minus |
| 2R | 18385514..18385571 | 17..74 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:42 Download gff for
BS20509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14272559..14272963 | 75..479 | 100 | <- | Minus |
| arm_2R | 14273019..14273076 | 17..74 | 100 | | Minus |
BS20509.pep Sequence
Translation from 16 to 480
> BS20509.pep
MKSLTLLALLILATLAFVHGGKVTINGKCVNCSHDQTTTTTHKPTSGKGS
GGRTTARPSSRSSPARGRPSWDDDDDDDLTGDWALHQSAGGTQYIGRRSK
RQSRGGQYIDLGGSGGRGGGGGWAGSGITTIDSSGYPGGTLVRNSDCVGC
NIRG*
BS20509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15067-PB | 154 | CG15067-PB | 1..154 | 1..154 | 831 | 100 | Plus |
| CG15067-PA | 154 | CG15067-PA | 1..154 | 1..154 | 831 | 100 | Plus |
