BS20514.complete Sequence
593 bp assembled on 2011-01-11
GenBank Submission: KX805819
> BS20514.complete
GAAGTTATCAGTCGACATGTCGTCGGAGCAGCCGGAGAACACCAGCTACG
AGCAGGAATGCCAACGGGCGGAGCTGCTGGGCCTCCAGCCACCGGATCCC
GCGGAGTTCGAGCGCAAACGGCAGGCACGACTGGAGCACGAGTTGGCCGA
GCAAGAGGCCGCCGAGGCGGTGCTGCTGGAGCAACAAGACGAGAGTCTGG
GCAATGTGGGCGGCAAGCTGGGCGAGCTCAATAGCATCCTGTCCAGCACG
CAGCAGAAGCTGAATCGCTTCAAGCAAACGGCATGTGGCAGTTTGACCAA
CATATTTGCCCGGGCCAGCTCGGGCTCGGTGGATCTTTCGGCGGGCATTG
GTAGATCGGGCTCAATCGCCTCCACACAGGAGGAGCGTCCTCCTGTCCAG
GAACAGCCACTGGCCAAGCCTCCGCCGACGGCTGCCGAGGTCAGCGCCGC
CAAGGCGGCCAAGCAGAAGCGCATGGACTCGCAGCTGGACAAGCTGGATG
CGCTGATCAACCAGGCGGACAACGCTCAGATAGCCATGAGTGAGCAGACA
CAGCAGATGCGCCGCCTGGCCAAGTGAAAGCTTTCTAGACCAT
BS20514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:53:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-RB | 561 | CG32544-PB | 1..561 | 17..577 | 2790 | 99.8 | Plus |
| CG32544-RA | 561 | CG32544-PA | 1..561 | 17..577 | 2790 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-RB | 1527 | CG32544-RB | 30..592 | 16..578 | 2800 | 99.8 | Plus |
| CG32544-RA | 1630 | CG32544-RA | 30..592 | 16..578 | 2800 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18860520..18860926 | 172..578 | 2020 | 99.8 | Plus |
| X | 23542271 | X | 18860313..18860469 | 16..172 | 785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:53:04 has no hits.
BS20514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:27 Download gff for
BS20514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..590 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:48 Download gff for
BS20514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..590 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:01 Download gff for
BS20514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32544-RA | 31..590 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:01 Download gff for
BS20514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18860314..18860469 | 17..172 | 100 | -> | Plus |
| X | 18860521..18860924 | 173..576 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:48 Download gff for
BS20514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18754347..18754502 | 17..172 | 100 | -> | Plus |
| arm_X | 18754554..18754957 | 173..576 | 99 | | Plus |
BS20514.pep Sequence
Translation from 16 to 576
> BS20514.pep
MSSEQPENTSYEQECQRAELLGLQPPDPAEFERKRQARLEHELAEQEAAE
AVLLEQQDESLGNVGGKLGELNSILSSTQQKLNRFKQTACGSLTNIFARA
SSGSVDLSAGIGRSGSIASTQEERPPVQEQPLAKPPPTAAEVSAAKAAKQ
KRMDSQLDKLDALINQADNAQIAMSEQTQQMRRLAK*
BS20514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:53:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32544-PB | 186 | CG32544-PB | 1..186 | 1..186 | 918 | 100 | Plus |
| CG32544-PA | 186 | CG32544-PA | 1..186 | 1..186 | 918 | 100 | Plus |
