BS20525.complete Sequence
677 bp assembled on 2011-01-11
GenBank Submission: KX800783
> BS20525.complete
GAAGTTATCAGTCGACATGTGCGCGAAATTCGTATGTGTAGTGCTGCTGG
CCAGCCTTGTGTGCGGTTCCATGGCCCTTCCCTCCCAGGACAACACCGAG
CGGGACCTGGTCAACATGCTGAACCGCTTAGACAGCGAGGAGTCCGTCGC
GCTGTTCGGCGGTCTGAGGATCGACCGGTCGGAGTCGGGCCGTAGCTTCG
GTGCATCCAAGGCCGTCGAGTCCTTCGAGGACCGCGCCGAGCGCTACCTG
GAGACCCACGAGCTAAACCTCTCCTTCTCCGGCGATGAGCAGGACGAGAA
CTCCGAGAACGAGTACACCGGACGCGCCATGGATGAGTCCCGCAGCAAGC
GCATGAAGAAGATGCTGCTGCCCCTTCTTTTGGCCCTGAAGCTGAAGAAG
GCCGTCGTTGTCAAGATTATGTTCACCATCATCAAGTTCATCTCGCTGAA
GGCTCTGGCCATCTCCTTCCTGGCCCTCATCCTGGCTGGTGCCACCTTCT
TCAAGGATCTGTTGGCCAAGAAGAAGGAACACATCACCACTGCCTACATC
ACCGGCAGCCCGCTGAACGCCGACATCGTGCACTCCGACTGGAGCCGCAA
TGGTCAGGCAGGTGCCGCCGATCTGGCCTACAACCACTATGGTCTGGCCC
AGCCCTTCTAAAAGCTTTCTAGACCAT
BS20525.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-RA | 645 | CG1157-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-RA | 1232 | CG1157-RA | 110..754 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6301913..6302231 | 17..335 | 1595 | 100 | Plus |
| 3R | 32079331 | 3R | 6303002..6303175 | 488..661 | 870 | 100 | Plus |
| 3R | 32079331 | 3R | 6302791..6302947 | 335..491 | 785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:58:39 has no hits.
BS20525.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:01 Download gff for
BS20525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 108..750 | 17..659 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:40 Download gff for
BS20525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 110..752 | 17..659 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:18 Download gff for
BS20525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi15-RA | 110..752 | 17..659 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:18 Download gff for
BS20525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6303003..6303173 | 489..659 | 100 | | Plus |
| 3R | 6301913..6302231 | 17..335 | 100 | -> | Plus |
| 3R | 6302792..6302944 | 336..488 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:40 Download gff for
BS20525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2128725..2128895 | 489..659 | 100 | | Plus |
| arm_3R | 2127635..2127953 | 17..335 | 100 | -> | Plus |
| arm_3R | 2128514..2128666 | 336..488 | 100 | -> | Plus |
BS20525.pep Sequence
Translation from 16 to 660
> BS20525.pep
MCAKFVCVVLLASLVCGSMALPSQDNTERDLVNMLNRLDSEESVALFGGL
RIDRSESGRSFGASKAVESFEDRAERYLETHELNLSFSGDEQDENSENEY
TGRAMDESRSKRMKKMLLPLLLALKLKKAVVVKIMFTIIKFISLKALAIS
FLALILAGATFFKDLLAKKKEHITTAYITGSPLNADIVHSDWSRNGQAGA
ADLAYNHYGLAQPF*
BS20525.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi15-PA | 214 | CG1157-PA | 1..214 | 1..214 | 1069 | 100 | Plus |
| Osi9-PA | 233 | CG15592-PA | 3..197 | 4..172 | 155 | 30.3 | Plus |
