Clone BS20526 Report

Search the DGRC for BS20526

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:205
Well:26
Vector:pDNR-Dual
Associated Gene/Transcriptantdh-RA
Protein status:BS20526.pep: gold
Sequenced Size:785

Clone Sequence Records

BS20526.complete Sequence

785 bp assembled on 2011-01-11

GenBank Submission: KX804201

> BS20526.complete
GAAGTTATCAGTCGACATGGAACGCTGGCAGAATCGCGTGGCCGTCGTCA
CTGGCGCCAGTTCGGGCATCGGATCGGCCATAGCCAAGGATCTGGTCCTA
GCCGGAATGACGGTGGTGGGTCTGGCCCGACGTGTCGATCGCGTCAAGGA
GCTGCAGAGGGAGCTGCCGGCGGAGAAGCGCGGCAAACTTTTTGCCCTCT
ACTGCGACGTGGGCAACGAGAGTTCCGTAAACGAGGCCTTCGATTGGATC
ATCCAAAAGTTGGGCGCCATCGATGTGCTGGTCAACAATGCCGGCACCCT
GCAACCCGGCTATCTGGTGGACATGAATCCGGCCGTAATGCAGCAGGTAT
TGCAGACGAACATCATGGGCATCGTGCTGTGCACCCAGCGAGCGGTGCGT
TCCATGCGGGAGCGCAAGTTCGACGGCCATGTGGTGCTCATCAATAGCAT
CCTGGGGCACAAGACCATGACGGCCACGGAGGGCGTGGCGCCCGATGTGA
ACGTCTATCCGCCCAGCAAGCATGCAGTTACAGCGCTGGCCGAAGGATAT
CGCCAGGAGTTCTTCGGCCTGGGCACCCGCATCAAGATTACGAGCGTCAG
TCCGGGCGTGGTGGACACGGAGATCGTGCCGGACAGCATTAGGGAGGCCA
TCAAGGATCGAATGCTCCACTCCGAGGACATCGCACAGGGAGTGCTGTAC
GCCATCGCCACACCGCCACATGTCCAGGTGCACGAGCTGATCATCAAGCC
ACTTGGCGAGACCATGTAGAAGCTTTCTAGACCAT

BS20526.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:46
Subject Length Description Subject Range Query Range Score Percent Strand
antdh-RA 753 CG1386-PA 1..753 17..769 3765 100 Plus
CG10962-RB 750 CG10962-PB 1..139 17..155 200 76.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:47
Subject Length Description Subject Range Query Range Score Percent Strand
antdh-RA 950 CG1386-RA 29..782 16..769 3770 100 Plus
CG10962-RB 1074 CG10962-RB 29..167 17..155 200 76.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11168454..11169030 592..16 2885 100 Minus
X 23542271 X 11168198..11168375 769..592 890 100 Minus
X 23542271 X 8974089..8974227 155..17 200 76.3 Minus
Blast to na_te.dros performed on 2014-11-26 15:58:44 has no hits.

BS20526.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:02 Download gff for BS20526.complete
Subject Subject Range Query Range Percent Splice Strand
antdh-RA 30..782 17..769 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:42 Download gff for BS20526.complete
Subject Subject Range Query Range Percent Splice Strand
antdh-RA 30..782 17..769 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:20 Download gff for BS20526.complete
Subject Subject Range Query Range Percent Splice Strand
antdh-RA 30..782 17..769 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:20 Download gff for BS20526.complete
Subject Subject Range Query Range Percent Splice Strand
X 11168198..11168374 593..769 100 <- Minus
X 11168454..11169029 17..592 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:42 Download gff for BS20526.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11062231..11062407 593..769 100 <- Minus
arm_X 11062487..11063062 17..592 100   Minus

BS20526.pep Sequence

Translation from 16 to 768

> BS20526.pep
MERWQNRVAVVTGASSGIGSAIAKDLVLAGMTVVGLARRVDRVKELQREL
PAEKRGKLFALYCDVGNESSVNEAFDWIIQKLGAIDVLVNNAGTLQPGYL
VDMNPAVMQQVLQTNIMGIVLCTQRAVRSMRERKFDGHVVLINSILGHKT
MTATEGVAPDVNVYPPSKHAVTALAEGYRQEFFGLGTRIKITSVSPGVVD
TEIVPDSIREAIKDRMLHSEDIAQGVLYAIATPPHVQVHELIIKPLGETM
*

BS20526.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:07
Subject Length Description Subject Range Query Range Score Percent Strand
antdh-PA 250 CG1386-PA 1..250 1..250 1263 100 Plus
CG40485-PB 247 CG40485-PB 1..245 1..248 697 54.4 Plus
CG40486-PC 247 CG40486-PC 1..245 1..248 694 54.8 Plus
CG40486-PB 247 CG40486-PB 1..245 1..248 694 54.8 Plus
CG10962-PB 249 CG10962-PB 1..247 1..248 618 49 Plus