BS20526.complete Sequence
785 bp assembled on 2011-01-11
GenBank Submission: KX804201
> BS20526.complete
GAAGTTATCAGTCGACATGGAACGCTGGCAGAATCGCGTGGCCGTCGTCA
CTGGCGCCAGTTCGGGCATCGGATCGGCCATAGCCAAGGATCTGGTCCTA
GCCGGAATGACGGTGGTGGGTCTGGCCCGACGTGTCGATCGCGTCAAGGA
GCTGCAGAGGGAGCTGCCGGCGGAGAAGCGCGGCAAACTTTTTGCCCTCT
ACTGCGACGTGGGCAACGAGAGTTCCGTAAACGAGGCCTTCGATTGGATC
ATCCAAAAGTTGGGCGCCATCGATGTGCTGGTCAACAATGCCGGCACCCT
GCAACCCGGCTATCTGGTGGACATGAATCCGGCCGTAATGCAGCAGGTAT
TGCAGACGAACATCATGGGCATCGTGCTGTGCACCCAGCGAGCGGTGCGT
TCCATGCGGGAGCGCAAGTTCGACGGCCATGTGGTGCTCATCAATAGCAT
CCTGGGGCACAAGACCATGACGGCCACGGAGGGCGTGGCGCCCGATGTGA
ACGTCTATCCGCCCAGCAAGCATGCAGTTACAGCGCTGGCCGAAGGATAT
CGCCAGGAGTTCTTCGGCCTGGGCACCCGCATCAAGATTACGAGCGTCAG
TCCGGGCGTGGTGGACACGGAGATCGTGCCGGACAGCATTAGGGAGGCCA
TCAAGGATCGAATGCTCCACTCCGAGGACATCGCACAGGGAGTGCTGTAC
GCCATCGCCACACCGCCACATGTCCAGGTGCACGAGCTGATCATCAAGCC
ACTTGGCGAGACCATGTAGAAGCTTTCTAGACCAT
BS20526.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
antdh-RA | 753 | CG1386-PA | 1..753 | 17..769 | 3765 | 100 | Plus |
CG10962-RB | 750 | CG10962-PB | 1..139 | 17..155 | 200 | 76.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
antdh-RA | 950 | CG1386-RA | 29..782 | 16..769 | 3770 | 100 | Plus |
CG10962-RB | 1074 | CG10962-RB | 29..167 | 17..155 | 200 | 76.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11168454..11169030 | 592..16 | 2885 | 100 | Minus |
X | 23542271 | X | 11168198..11168375 | 769..592 | 890 | 100 | Minus |
X | 23542271 | X | 8974089..8974227 | 155..17 | 200 | 76.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:58:44 has no hits.
BS20526.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:02 Download gff for
BS20526.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
antdh-RA | 30..782 | 17..769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:42 Download gff for
BS20526.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
antdh-RA | 30..782 | 17..769 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:20 Download gff for
BS20526.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
antdh-RA | 30..782 | 17..769 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:20 Download gff for
BS20526.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11168198..11168374 | 593..769 | 100 | <- | Minus |
X | 11168454..11169029 | 17..592 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:42 Download gff for
BS20526.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11062231..11062407 | 593..769 | 100 | <- | Minus |
arm_X | 11062487..11063062 | 17..592 | 100 | | Minus |
BS20526.pep Sequence
Translation from 16 to 768
> BS20526.pep
MERWQNRVAVVTGASSGIGSAIAKDLVLAGMTVVGLARRVDRVKELQREL
PAEKRGKLFALYCDVGNESSVNEAFDWIIQKLGAIDVLVNNAGTLQPGYL
VDMNPAVMQQVLQTNIMGIVLCTQRAVRSMRERKFDGHVVLINSILGHKT
MTATEGVAPDVNVYPPSKHAVTALAEGYRQEFFGLGTRIKITSVSPGVVD
TEIVPDSIREAIKDRMLHSEDIAQGVLYAIATPPHVQVHELIIKPLGETM
*
BS20526.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
antdh-PA | 250 | CG1386-PA | 1..250 | 1..250 | 1263 | 100 | Plus |
CG40485-PB | 247 | CG40485-PB | 1..245 | 1..248 | 697 | 54.4 | Plus |
CG40486-PC | 247 | CG40486-PC | 1..245 | 1..248 | 694 | 54.8 | Plus |
CG40486-PB | 247 | CG40486-PB | 1..245 | 1..248 | 694 | 54.8 | Plus |
CG10962-PB | 249 | CG10962-PB | 1..247 | 1..248 | 618 | 49 | Plus |