BS20527.complete Sequence
1001 bp assembled on 2011-01-11
GenBank Submission: KX806033
> BS20527.complete
GAAGTTATCAGTCGACATGCTCAAGAACTGGACAATAAATACGTTCCTTT
TGGTTTCGTTTCTTTGTAGTGCGACTGGGCAAAATGAAGGAGGAGCACCT
GGAATATTCAACGGAATGTCATTCACGGAAAATCTTCAACCAGACCCAAA
TCAAGTTTGCGGCATGAGCAATCCAAATGGCTTGGTGGCCAATGTGAAGG
TGCCCAAAGATTACTCCACACCTGGCCAATTTCCATGGGTGGTTGCCCTT
TTCAGTCAGGGAAAATACTTTGGGGCCGGTTCTTTGATTGCCCCAGAAGT
AGTCCTTACAGCGGCTAGCATTGTGGTGGGCAAGACTGATGCGGAAATTG
TGGTGAGAGCAGGCGAATGGAATACGGGACAACGCAGTGAATTCCTACCG
TCGGAGGATCGTCCGGTGGCCAGAGTTGTGCAACACAGGGAGTTTTCGTA
TTTATTGGGAGCCAATAACATTGCCCTTCTGTTCCTAGCCAACCCATTTG
AGTTGAAAAGCCACATCCGAACCATCTGCTTGCCCAGCCAGGGAAGGTCC
TTCGATCAGAAGCGCTGCTTGGTGACCGGATGGGGAAAGGTGGCATTCAA
CGATGAAAATTACTCAAATATCCAAAAGAAAATCGAACTGCCGATGATTA
ACAGGGCGCAGTGCCAGGATCAGTTGAGAAACACCAGATTGGGCGTCTCG
TTTGATCTGCCTGCTAGTCTGATATGCGCCGGCGGCGAGAAGGATGCGGG
AGACTGCCTCGGCGACGGAGGATCCGCTCTATTCTGCCCCATGGAGGCGG
ACCCATCGCGCTATGAGCAGGCTGGCATCGTTAACTGGGGCATCGGCTGT
CAAGAGGAAAACGTTCCAGCAGTCTACACAAATGTTGAAATGTTTCGGGA
TTGGATCTATGAGCACATGGCCCAGAACTCCAACAGTGTTCCATTCGCTG
CTGGTCAGTTACCATCGAACTATAAACAGGAATAAAAGCTTTCTAGACCA
T
BS20527.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-RA | 969 | CG14990-PA | 1..969 | 17..985 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-RA | 1072 | CG14990-RA | 32..1001 | 16..985 | 4850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4093383..4094273 | 95..985 | 4455 | 100 | Plus |
| 3L | 28110227 | 3L | 4093238..4093317 | 16..95 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:58:50 has no hits.
BS20527.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:03 Download gff for
BS20527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 34..1000 | 17..983 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:44 Download gff for
BS20527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 33..999 | 17..983 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:22 Download gff for
BS20527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14990-RA | 33..999 | 17..983 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:22 Download gff for
BS20527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4093383..4094271 | 95..983 | 100 | | Plus |
| 3L | 4093239..4093316 | 17..94 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:44 Download gff for
BS20527.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4093383..4094271 | 95..983 | 100 | | Plus |
| arm_3L | 4093239..4093316 | 17..94 | 100 | -> | Plus |
BS20527.pep Sequence
Translation from 16 to 984
> BS20527.pep
MLKNWTINTFLLVSFLCSATGQNEGGAPGIFNGMSFTENLQPDPNQVCGM
SNPNGLVANVKVPKDYSTPGQFPWVVALFSQGKYFGAGSLIAPEVVLTAA
SIVVGKTDAEIVVRAGEWNTGQRSEFLPSEDRPVARVVQHREFSYLLGAN
NIALLFLANPFELKSHIRTICLPSQGRSFDQKRCLVTGWGKVAFNDENYS
NIQKKIELPMINRAQCQDQLRNTRLGVSFDLPASLICAGGEKDAGDCLGD
GGSALFCPMEADPSRYEQAGIVNWGIGCQEENVPAVYTNVEMFRDWIYEH
MAQNSNSVPFAAGQLPSNYKQE*
BS20527.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14990-PA | 322 | CG14990-PA | 1..322 | 1..322 | 1715 | 100 | Plus |
| CG18478-PA | 294 | CG18478-PA | 21..287 | 38..304 | 720 | 50.2 | Plus |
| CG31827-PA | 294 | CG31827-PA | 21..287 | 38..304 | 720 | 50.2 | Plus |
| SPH93-PA | 494 | CG6639-PA | 214..486 | 23..301 | 703 | 50 | Plus |
| CG3117-PB | 347 | CG3117-PB | 82..334 | 51..303 | 659 | 47.8 | Plus |
