BS20528.complete Sequence
782 bp assembled on 2011-01-11
GenBank Submission: KX802237
> BS20528.complete
GAAGTTATCAGTCGACATGGCTAAAATCTTAATCAGTGCTCTATTGTGCG
TTGCCATGTTTGGCTCAATGGCTCTTGGCTCGCCGGAATGCCCCACGCCC
AATGGACGATTTGCATCGGGTGACCAGTGCGACTCTTACACAGAGTGTCA
GGATGGTACTCCCGTGGAGAAGCTGTGTCCGGACGGCCTGCTCTTCCACC
AGCGCACCAAGGCGACCGGAGAGTGCACATACGCCCCGTACTCCACCTGC
AAGGAGAGGGCTCGCCTGCAGCCCGCCAACGGAACGGAGGAGTGTCCCCG
CCAGTTCGGCTTCTATCCGAACGGAGATGCGACCAAGTGCGGCGTCTATC
GCAACTGCGCCCACGGCGTGGCCAGCCTAACCAAGTGCCCCGAGGGCCTG
GCGTTCAACGAGGAGACCTACCAGTGCGACTGGCCCGATCTAGTGGAAAG
TTGCAACGCCGAGGCGTACCTGGGCTTCAATTGCCCCGCCGCCGATTCCG
CCGATGATAGCGCTGCCGCCGCCGTGGATGTCAGCCCGGAGGGTGAGCTG
CGCTACTATCGCCATCCCCAGACCTGCAAGAAGTACTTCGTGTGCGTCAA
CGGACATCCGCGCCTGTACAACTGCGGCAAGTATCTGGCCTTCAACTCGC
AGACGAAACTGTGCGACTTCTACAACAAGGTGCCCGAGTGCTATGCCCTG
CTCAAGGAGAAGCAGCGCCTGAAGGCGGAGAAGCAACAGCCCCAGGTGGC
TCAGCCGGAGGACTAGAAGCTTTCTAGACCAT
BS20528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-RB | 750 | CG11142-PB | 1..750 | 17..766 | 3750 | 100 | Plus |
| obst-E-RA | 729 | CG11142-PA | 1..57 | 17..73 | 285 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-RB | 998 | CG11142-RB | 128..877 | 17..766 | 3750 | 100 | Plus |
| obst-E-RA | 994 | CG11142-RA | 128..184 | 17..73 | 285 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5762674..5763369 | 766..71 | 3480 | 100 | Minus |
| 2L | 23513712 | 2L | 5765961..5766015 | 71..17 | 275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:58:53 has no hits.
BS20528.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:04 Download gff for
BS20528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 127..876 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:46 Download gff for
BS20528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 128..877 | 17..766 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:24 Download gff for
BS20528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| obst-E-RB | 128..877 | 17..766 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:24 Download gff for
BS20528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5762674..5763368 | 72..766 | 100 | <- | Minus |
| 2L | 5765961..5766015 | 17..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:46 Download gff for
BS20528.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5762674..5763368 | 72..766 | 100 | <- | Minus |
| arm_2L | 5765961..5766015 | 17..71 | 100 | | Minus |
BS20528.pep Sequence
Translation from 16 to 765
> BS20528.pep
MAKILISALLCVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQDGTPV
EKLCPDGLLFHQRTKATGECTYAPYSTCKERARLQPANGTEECPRQFGFY
PNGDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEA
YLGFNCPAADSADDSAAAAVDVSPEGELRYYRHPQTCKKYFVCVNGHPRL
YNCGKYLAFNSQTKLCDFYNKVPECYALLKEKQRLKAEKQQPQVAQPED*
BS20528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| obst-E-PB | 249 | CG11142-PB | 1..249 | 1..249 | 1384 | 100 | Plus |
| obst-E-PA | 242 | CG11142-PA | 1..228 | 1..232 | 564 | 48.9 | Plus |
| obst-A-PB | 237 | CG17052-PB | 8..225 | 6..225 | 384 | 38.1 | Plus |
| obst-A-PA | 237 | CG17052-PA | 8..225 | 6..225 | 384 | 38.1 | Plus |
| obst-B-PA | 337 | CG4778-PA | 85..285 | 24..232 | 337 | 33.5 | Plus |
