BS20531.complete Sequence
974 bp assembled on 2011-01-11
GenBank Submission: KX805621
> BS20531.complete
GAAGTTATCAGTCGACATGAGGTCTTCAGTACCGGTTTGTCTAATCCTGC
TCGCTCTGGCGTTGGGATCGGCGTGGGCTAATGATAATCCCTGCCAGGAT
GTGCGCATTCCCGGCTTCGTTTGCATGAACTGCACCACCTTGGGCTACTG
CATCCGCGATGCCACCGGCAGCTGGGAAACGATTTCGATGCTGGGCTGCC
AATCGGAGTACAATTTCTATTGCAGCGACGAGGGTACCTTCGGATGCACC
TTCCAGTCGCAGTGCCAGGTGCCCAAGAGAGGTCCCTTCAGCTGTCAGCA
GGCGGGCCTGTTCCCGGATCCGTACGACTGTAGGCGGTACCACGAGTGCA
GCGATCAGAGTGTGGACACCCCTCGCATCTGCTCCAACGGAGCGGGCTAC
TCCACACTCACGGGCACTTGTGTTCTGCCACGGGAGAGTGAGCAGTGCAT
CCAGGAGCAGTTCACCTGCAGTCGGTCGGGACAAGTGGGTGGATGGGCGC
CCGACAATCGGTACTTCTACGTCTGCGTCAATGACACGGCCAATTCGCTG
TATCCGCTGATGATGAAGTGCCACGAGGGATTCGTTTTCAACAGCTACAG
CTGTGTGCCCGACACCAGGAGCATGAGGAGCATTCAGGCGATGGAGTCCC
ACACGTGCATGAACAACGATAGGTACCAATGCCCCTTCCGAACCTCTGAG
ATCGAGTACTGCAAGTGCGTCGATGGAGAACTGGAGGTGATGACCTGTCC
CGCCGGCTTCCAAATTGATCCTAAGATCCTGACCTGCGTGACTGATAGGA
TCTATCAGTGCTCGGACTTTGAGATCCTCAGCTGTCCCAATGTCTCCACC
AAGGATGAGTACTGCATATGCATCGATCACCAGCTGCAGATCTACAGCTG
TCCAATGGGACAGTATTTCAATGCTGAGACTCGAAAGTGCCAATCAGAGT
CAGAGTAAAAGCTTTCTAGACCAT
BS20531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32302-RA | 942 | CG32302-PA | 1..942 | 17..958 | 4710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32302-RA | 1079 | CG32302-RA | 16..957 | 17..958 | 4710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2268840..2269781 | 17..958 | 4710 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:59:06 has no hits.
BS20531.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:08 Download gff for
BS20531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 14..953 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:52 Download gff for
BS20531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 16..955 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:29 Download gff for
BS20531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32302-RA | 16..955 | 17..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:29 Download gff for
BS20531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2268840..2269779 | 17..956 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:52 Download gff for
BS20531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2268840..2269779 | 17..956 | 100 | | Plus |
BS20531.pep Sequence
Translation from 16 to 957
> BS20531.pep
MRSSVPVCLILLALALGSAWANDNPCQDVRIPGFVCMNCTTLGYCIRDAT
GSWETISMLGCQSEYNFYCSDEGTFGCTFQSQCQVPKRGPFSCQQAGLFP
DPYDCRRYHECSDQSVDTPRICSNGAGYSTLTGTCVLPRESEQCIQEQFT
CSRSGQVGGWAPDNRYFYVCVNDTANSLYPLMMKCHEGFVFNSYSCVPDT
RSMRSIQAMESHTCMNNDRYQCPFRTSEIEYCKCVDGELEVMTCPAGFQI
DPKILTCVTDRIYQCSDFEILSCPNVSTKDEYCICIDHQLQIYSCPMGQY
FNAETRKCQSESE*
BS20531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32302-PA | 313 | CG32302-PA | 1..313 | 1..313 | 1761 | 100 | Plus |
| CG13806-PA | 297 | CG13806-PA | 35..293 | 24..258 | 301 | 28.7 | Plus |
| obst-I-PA | 219 | CG32304-PA | 38..154 | 195..308 | 177 | 31.6 | Plus |
