BS20535.complete Sequence
719 bp assembled on 2011-01-11
GenBank Submission: KX801896
> BS20535.complete
GAAGTTATCAGTCGACATGTTGTGTCCGCCAATGGCCCTGGGCCCATTTC
TCGCCGCCCCCGTGCCACGCCCACCGCCCAGCGCATCGGAGAAGAAGAGA
ATCTGTCGGAACCTATTCAATAACGCTCCCGGGGACTCGAATATCGATCA
GCTGTTGGCCCAGGAGCAGCACACGCAGAGATTATACGTTAAGGAACGCT
ACGGATATGACATCCAGCTGGAATCTAATCGGGATGCGGATGCGAATACG
GATGCGGATGCTGATACGGATGCCCATTGTCAGGTCCTGCGCGGAATGCG
GTATCCGACCTCAAGGACGATATCCAGCACCGATGCCGATGAGTGCAATC
CAAAGGCAGTCAGCCAAGCGCCGAGGGGCATGGCCCTGACTCCCGCCCAG
ATCTCCGCCAGCGCAAAGCTGATCCTTCAGAAATGCCCGGAAAGCGATCG
CAAAAAAAGCAACGGCAGTGCGGATTTGGCCAACTGCACGCGACATGGCC
AAAAGCCATATGCGAGGCAGCCACAAGGCCTCAAAGGCATGTACAATGTT
CGCAAGACCGTGAATGGTATTTCGAAACCCAACGTCAAGAATGGTTACAA
CAACAACAACAACAGCAGCAGCAGCAACAACAACAGCAACATGAATATTA
ATAATAAGATTGTGGATAATGGTACTAGCGAATTGGCAGATCAGAAGCAG
TAAAAGCTTTCTAGACCAT
BS20535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-RA | 687 | CG6575-PA | 1..687 | 17..703 | 3435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-RA | 2050 | CG6575-RA | 347..1034 | 16..703 | 3440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21855399..21855920 | 537..16 | 2610 | 100 | Minus |
3R | 32079331 | 3R | 21851710..21851878 | 703..535 | 845 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:52:18 has no hits.
BS20535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:16 Download gff for
BS20535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 349..1028 | 22..701 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:43:41 Download gff for
BS20535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 353..1032 | 22..701 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:50:45 Download gff for
BS20535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
glec-RA | 353..1032 | 22..701 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:50:45 Download gff for
BS20535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21851712..21851876 | 537..701 | 100 | <- | Minus |
3R | 21855400..21855914 | 22..536 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:43:41 Download gff for
BS20535.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17677434..17677598 | 537..701 | 100 | <- | Minus |
arm_3R | 17681122..17681636 | 22..536 | 100 | | Minus |
BS20535.pep Sequence
Translation from 16 to 702
> BS20535.pep
MLCPPMALGPFLAAPVPRPPPSASEKKRICRNLFNNAPGDSNIDQLLAQE
QHTQRLYVKERYGYDIQLESNRDADANTDADADTDAHCQVLRGMRYPTSR
TISSTDADECNPKAVSQAPRGMALTPAQISASAKLILQKCPESDRKKSNG
SADLANCTRHGQKPYARQPQGLKGMYNVRKTVNGISKPNVKNGYNNNNNS
SSSNNNSNMNINNKIVDNGTSELADQKQ*
BS20535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:58:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
glec-PA | 228 | CG6575-PA | 1..228 | 1..228 | 1202 | 100 | Plus |