BS20554.complete Sequence
1064 bp assembled on 2011-01-11
GenBank Submission: KX804916
> BS20554.complete
GAAGTTATCAGTCGACATGGCGGCCAGTAGCGGTGATTCCAAAATGACCC
AACAGAGGCCAGCTTTCGACTCCAATGCGATGACGCTGACGCGTTTCGTG
CTGCAGGAGCAGCGAAAGTTCAAGAGCGCCACTGGCGATCTCTCCCAGCT
GCTCAACTCCATCCAGACCGCCATCAAGGCTACATCATCCGCGGTGCGGA
AGGCAGGTATCGCCAAGCTCCATGGATTCGCTGGCGACGTGAATGTCCAA
GGCGAGGAGGTCAAGAAACTGGACGTGCTCTCCAACGAGCTGTTCATCAA
CATGCTGAAGTCATCCTATACCACATGTCTAATGGTTTCCGAGGAGAACG
AGAATGTGATCGAGGTGGAAGTGGAGAAACAGGGCAAATACATCGTGTGC
TTCGATCCCTTGGATGGATCCTCCAACATAGACTGCCTGGTGTCGATCGG
TTCAATCTTCGCCATTTACCGCAAGAAAAGCGATGGTCCGCCCACAGTGG
AGGATGCACTGCAGCCCGGAAATCAGCTGGTGGCCGCCGGCTACGCGCTA
TACGGTTCGGCCACAGCAATTGTCCTGGGTCTGGGTTCGGGAGTGAATGG
CTTCACTTATGACCCGGCCATCGGAGAGTTCGTGCTGACCGATCCCAACA
TGCGGGTGCCGGAGAAGGGAAAGATATACTCTATCAACGAGGGATATGCA
GCGGATTGGGAGGATGGTGTCTTCAACTACATTGCGGCCAAGAAGGATCC
CGCCAAGGGAAAGCCCTATGGAGCGCGGTACGTGGGTTCCATGGTCGCGG
ATGTGCATCGCACCATTAAATACGGCGGCATCTTTATCTATCCGGCAACA
AAGTCCGCTCCCAGCGGAAAACTTCGTCTGCTGTACGAGTGCGTGCCCAT
GGCCTATCTGATGATCCAGGCTGGAGGTCTGGCCAGCGACGGAAAGATCA
GCATTTTGGACATTGTGCCCAAGAAGATCCACGAGCGCAGTCCCATATTC
CTAGGATCCAAGTCCGACGTGGAGGAGGCACTTAGCTACTTAAAGTGAAA
GCTTTCTAGACCAT
BS20554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbp-RE | 1005 | CG31692-PE | 1..1005 | 44..1048 | 5025 | 100 | Plus |
| fbp-RA | 1005 | CG31692-PA | 1..1005 | 44..1048 | 5025 | 100 | Plus |
| fbp-RD | 969 | CG31692-PD | 1..969 | 80..1048 | 4845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbp-RE | 1202 | CG31692-RE | 118..1149 | 17..1048 | 5160 | 100 | Plus |
| fbp-RA | 1130 | CG31692-RA | 66..1077 | 37..1048 | 5060 | 100 | Plus |
| fbp-RD | 1185 | CG31692-RD | 140..1132 | 56..1048 | 4965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19761640..19762308 | 1048..380 | 3345 | 100 | Minus |
| 2L | 23513712 | 2L | 19762487..19762831 | 383..39 | 1725 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:58:21 has no hits.
BS20554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:57 Download gff for
BS20554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RB | 116..1146 | 17..1047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:32 Download gff for
BS20554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RE | 118..1148 | 17..1047 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:12 Download gff for
BS20554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fbp-RE | 118..1148 | 17..1047 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:12 Download gff for
BS20554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19761641..19762305 | 383..1047 | 100 | <- | Minus |
| 2L | 19762488..19762831 | 39..382 | 100 | <- | Minus |
| 2L | 19763426..19763447 | 17..38 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:32 Download gff for
BS20554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19761641..19762305 | 383..1047 | 100 | <- | Minus |
| arm_2L | 19762488..19762831 | 39..382 | 100 | <- | Minus |
| arm_2L | 19763426..19763447 | 17..38 | 100 | | Minus |
BS20554.pep Sequence
Translation from 16 to 1047
> BS20554.pep
MAASSGDSKMTQQRPAFDSNAMTLTRFVLQEQRKFKSATGDLSQLLNSIQ
TAIKATSSAVRKAGIAKLHGFAGDVNVQGEEVKKLDVLSNELFINMLKSS
YTTCLMVSEENENVIEVEVEKQGKYIVCFDPLDGSSNIDCLVSIGSIFAI
YRKKSDGPPTVEDALQPGNQLVAAGYALYGSATAIVLGLGSGVNGFTYDP
AIGEFVLTDPNMRVPEKGKIYSINEGYAADWEDGVFNYIAAKKDPAKGKP
YGARYVGSMVADVHRTIKYGGIFIYPATKSAPSGKLRLLYECVPMAYLMI
QAGGLASDGKISILDIVPKKIHERSPIFLGSKSDVEEALSYLK*
BS20554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fbp-PE | 334 | CG31692-PE | 1..334 | 10..343 | 1702 | 100 | Plus |
| fbp-PA | 334 | CG31692-PA | 1..334 | 10..343 | 1702 | 100 | Plus |
| fbp-PD | 322 | CG31692-PD | 1..322 | 22..343 | 1640 | 100 | Plus |
| fbp-PC | 322 | CG31692-PC | 1..322 | 22..343 | 1640 | 100 | Plus |
