BS20563.complete Sequence
563 bp assembled on 2011-01-11
GenBank Submission: KX802063
> BS20563.complete
GAAGTTATCAGTCGACATGAACAAATGTTTTAGGTGCCAGCCCCGGATAT
CGCTTTTCCAGTTCAGCCTACCGCGGTGCTATGCCGCAGTGCAGCCGGGA
TGTCCACCGCCACAAGAAAAACCCGTCGTCGGTTTGCCACACAAGCCCGA
TCCCAAGACGGTGAAGTGCGACTATATAGGACCGCCAGACGCGCAATCAA
ACCTACGTCCGTACGTACGGCACTACGGCGATGAGGAGACGCGGCTGGCA
AGAAGCCTGCGTCTTAAGCGGATCGAGGTGGAGGCATGGAACACGGACTT
CTGGACAAAACACAATAAGCGCTTCTACGAGGAAAAGGAAGACTTCATCC
GCCTGCACAAGGAAAGCGGAACCAGCGAAGTGTCCGCGGACCAGATGAGC
CACTTCTACAAAGCGTTCCTCGACAAGAACTGGCGCATCCACATCATGTA
CAACATCTCCTGGTACCTGAAGAACTTCGACATACTCACCCTGGCTGCCG
CAGTCCAGCTCCAGAGGCTTCTGGCGCTGGCCAAGCGAAGATCTTAGAAG
CTTTCTAGACCAT
BS20563.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-RB | 531 | CG14806-PB | 1..531 | 17..547 | 2655 | 100 | Plus |
| CG14806-RA | 531 | CG14806-PA | 1..531 | 17..547 | 2655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-RB | 770 | CG14806-RB | 43..573 | 17..547 | 2655 | 100 | Plus |
| CG14806-RA | 1019 | CG14806-RA | 292..822 | 17..547 | 2655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1880683..1880947 | 68..332 | 1325 | 100 | Plus |
| X | 23542271 | X | 1881018..1881235 | 330..547 | 1090 | 100 | Plus |
| X | 23542271 | X | 1880573..1880623 | 17..67 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:59:32 has no hits.
BS20563.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:15 Download gff for
BS20563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 277..807 | 17..547 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:01 Download gff for
BS20563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 292..822 | 17..547 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:41 Download gff for
BS20563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14806-RA | 292..822 | 17..547 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:41 Download gff for
BS20563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1880573..1880623 | 17..67 | 100 | -> | Plus |
| X | 1880683..1880946 | 68..331 | 100 | -> | Plus |
| X | 1881020..1881235 | 332..547 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:01 Download gff for
BS20563.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1774606..1774656 | 17..67 | 100 | -> | Plus |
| arm_X | 1774716..1774979 | 68..331 | 100 | -> | Plus |
| arm_X | 1775053..1775268 | 332..547 | 100 | | Plus |
BS20563.pep Sequence
Translation from 16 to 546
> BS20563.pep
MNKCFRCQPRISLFQFSLPRCYAAVQPGCPPPQEKPVVGLPHKPDPKTVK
CDYIGPPDAQSNLRPYVRHYGDEETRLARSLRLKRIEVEAWNTDFWTKHN
KRFYEEKEDFIRLHKESGTSEVSADQMSHFYKAFLDKNWRIHIMYNISWY
LKNFDILTLAAAVQLQRLLALAKRRS*
BS20563.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14806-PB | 176 | CG14806-PB | 1..176 | 1..176 | 960 | 100 | Plus |
| CG14806-PA | 176 | CG14806-PA | 1..176 | 1..176 | 960 | 100 | Plus |
