BS20567.complete Sequence
560 bp assembled on 2011-01-11
GenBank Submission: KX803831
> BS20567.complete
GAAGTTATCAGTCGACATGTCGGCGTTTGTGAAAACCGTGTGCTTGGCCC
AAAAGCTGTGCGCCGCCAATCCCGTCGTGGCTCGCCAGGCGATCCGCAGC
ATGGCTGGCTGGAATAAGGACTACAAGCCGGGTCCGTATCCACAGACGGA
GAAGGAGCGCCTGGCGGCGGCCAAGAAGTACTATCTGTTGCCGGAGGAGT
ACAAACCGTATGCGGACGATGGTCTGGGCTACGGAGATTATCCCAAATTG
GGCTACGGTCTGGGTGTGGAGGCCAAGGACTCGTACTATCCCTGGGACTA
TCCGGAGCACAAGCGCAACCAACACGAGCCCATCTCGGCGGATCATGATC
TGTACAGCGAGGATCGCTGGTCGCAGGCCGAACCGCCACGCTACAGCAAT
GCGTACTACTTTGCCTGCTTCCTGGGCGTGATGTCCGGCTGCCTGGCACT
CTACTACTGGCTGGATGACAAGAAGATGTACCGCCCCGTGGCCGCCAAGC
AATATCCCAGCCCTGGCGTCAAGCACTACACCTTCGAGAAGTAGAAGCTT
TCTAGACCAT
BS20567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3192-RC | 528 | CG3192-PC | 1..528 | 17..544 | 2640 | 100 | Plus |
| CG3192-RB | 528 | CG3192-PB | 1..528 | 17..544 | 2640 | 100 | Plus |
| CG3192-RA | 528 | CG3192-PA | 1..528 | 17..544 | 2640 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3192-RC | 706 | CG3192-RC | 78..605 | 17..544 | 2640 | 100 | Plus |
| CG3192-RB | 805 | CG3192-RB | 177..704 | 17..544 | 2640 | 100 | Plus |
| CG3192-RA | 1321 | CG3192-RA | 693..1220 | 17..544 | 2640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6677652..6677881 | 331..102 | 1150 | 100 | Minus |
| X | 23542271 | X | 6677363..6677575 | 544..332 | 1065 | 100 | Minus |
| X | 23542271 | X | 6678000..6678084 | 101..17 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:59:41 has no hits.
BS20567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:17 Download gff for
BS20567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 693..1220 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:05 Download gff for
BS20567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 693..1220 | 17..544 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:47 Download gff for
BS20567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3192-RA | 693..1220 | 17..544 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:47 Download gff for
BS20567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6677652..6677881 | 102..331 | 100 | <- | Minus |
| X | 6678000..6678084 | 17..101 | 100 | | Minus |
| X | 6677363..6677575 | 332..544 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:05 Download gff for
BS20567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6571685..6571914 | 102..331 | 100 | <- | Minus |
| arm_X | 6572033..6572117 | 17..101 | 100 | | Minus |
| arm_X | 6571396..6571608 | 332..544 | 100 | <- | Minus |
BS20567.pep Sequence
Translation from 16 to 543
> BS20567.pep
MSAFVKTVCLAQKLCAANPVVARQAIRSMAGWNKDYKPGPYPQTEKERLA
AAKKYYLLPEEYKPYADDGLGYGDYPKLGYGLGVEAKDSYYPWDYPEHKR
NQHEPISADHDLYSEDRWSQAEPPRYSNAYYFACFLGVMSGCLALYYWLD
DKKMYRPVAAKQYPSPGVKHYTFEK*
BS20567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3192-PC | 175 | CG3192-PC | 1..175 | 1..175 | 978 | 100 | Plus |
| CG3192-PB | 175 | CG3192-PB | 1..175 | 1..175 | 978 | 100 | Plus |
| CG3192-PA | 175 | CG3192-PA | 1..175 | 1..175 | 978 | 100 | Plus |
