BS20568.complete Sequence
467 bp assembled on 2011-01-11
GenBank Submission: KX800481
> BS20568.complete
GAAGTTATCAGTCGACATGGATTCCGTCTATCCAGCTGCACCCTTGGAGG
CGCCCAAGGGATCCGTCGAGCTGCAGGCGACACCCGAGCAACAACACCTT
CTGCCACCGGCTCCACCCAGTTACGACCAGGCCACAACCACTCCGGCTGA
AACCACGGGACCAGCTCCAGTTCCAGCGAGCACATCCACCACACAGCACA
CGGTCGTCGTGGTGCCCGGTTCACCGTACGGCCCGGAGCCCATGGACGTG
CAGTGCCCGTACTGCCACAATTACGCCCGGACACGGGTCTCCTTCAAGCC
CAACTCGCGCACCCATCTGATAGCCTTGATATTATGCCTGTTCCAGTTGT
ACTGCTGTGTGTGTCTGCCGTACTGCATTTCCAGTTGCATGAACACCAAT
CACTACTGTGGCATGTGCGATCGTTATTTGGGCACCTACGATCGCAAATG
AAAGCTTTCTAGACCAT
BS20568.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30269-RB | 435 | CG30269-PB | 1..435 | 17..451 | 2175 | 100 | Plus |
| CG30269-RA | 435 | CG30269-PA | 1..435 | 17..451 | 2175 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30273-RB | 1234 | CG30273-RB | 705..1140 | 16..451 | 2180 | 100 | Plus |
| CG30269-RB | 1234 | CG30269-RB | 705..1140 | 16..451 | 2180 | 100 | Plus |
| CG30269-RA | 577 | CG30269-RA | 48..483 | 16..451 | 2180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22667986..22668317 | 16..347 | 1660 | 100 | Plus |
| 2R | 25286936 | 2R | 22668649..22668754 | 346..451 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:59:46 has no hits.
BS20568.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:33:18 Download gff for
BS20568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30269-RA | 46..479 | 17..450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:45:07 Download gff for
BS20568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30269-RA | 49..482 | 17..450 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:49 Download gff for
BS20568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30269-RA | 49..482 | 17..450 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:49 Download gff for
BS20568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22667987..22668315 | 17..345 | 100 | -> | Plus |
| 2R | 22668649..22668753 | 346..450 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:45:07 Download gff for
BS20568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18555492..18555820 | 17..345 | 100 | -> | Plus |
| arm_2R | 18556154..18556258 | 346..450 | 100 | | Plus |
BS20568.pep Sequence
Translation from 16 to 450
> BS20568.pep
MDSVYPAAPLEAPKGSVELQATPEQQHLLPPAPPSYDQATTTPAETTGPA
PVPASTSTTQHTVVVVPGSPYGPEPMDVQCPYCHNYARTRVSFKPNSRTH
LIALILCLFQLYCCVCLPYCISSCMNTNHYCGMCDRYLGTYDRK*
BS20568.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:55:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30269-PB | 144 | CG30269-PB | 1..144 | 1..144 | 805 | 100 | Plus |
| CG30269-PA | 144 | CG30269-PA | 1..144 | 1..144 | 805 | 100 | Plus |
| CG30273-PB | 128 | CG30273-PB | 11..126 | 23..142 | 286 | 42.9 | Plus |
| CG13510-PC | 129 | CG13510-PC | 7..128 | 33..142 | 254 | 41.8 | Plus |
| CG13510-PB | 129 | CG13510-PB | 7..128 | 33..142 | 254 | 41.8 | Plus |
