Clone BS20595 Report

Search the DGRC for BS20595

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:205
Well:95
Vector:pDNR-Dual
Associated Gene/TranscriptCG34217-RA
Protein status:BS20595.pep: full length peptide match
Sequenced Size:449

Clone Sequence Records

BS20595.complete Sequence

449 bp assembled on 2011-01-11

GenBank Submission: KX802368

> BS20595.complete
GAAGTTATCAGTCGACATGCCAGGAAATCTGTTTCAAGTGTTACTAACTG
TGGCGATCCTGCCAGCTATTAGTTTGGCATCTAGTTCTGAAGATGGTCTG
CACCATTACCGTGCTTCTCCAAAGCTCACGGGTCCTGTGAAGCTCCTACA
CGATCCCGAGGACACCATTCTGAACACCTTGGATGGCGCTCTGGAGAAGA
TCTCCACCATCTACATGCAGGCCTTGTTCGCTGGTACCCACACCCCGGAA
CTGGAAGCCCCACTCCGAGCCCTCGAAATCGAGTTGTTCGATCTGCTGGA
CGAGCTCTATAATCAGAATCGTCTCAAGGACTATATAAAGTACGAGGCGG
AAGTGACGCGACAAATGATAATCTACAACATGCTGAAGAGATTGTTTGGC
TACACACAGGAAAATGAGGCTGGATCTGTCTGAAAGCTTTCTAGACCAT

BS20595.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG34217-RA 417 CG34217-PA 1..417 17..433 2085 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG34217-RA 738 CG34217-RA 112..529 16..433 2090 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8228199..8228616 433..16 2090 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:54:31 has no hits.

BS20595.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-11 10:32:36 Download gff for BS20595.complete
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 110..525 17..432 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:44:02 Download gff for BS20595.complete
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 113..528 17..432 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:51:32 Download gff for BS20595.complete
Subject Subject Range Query Range Percent Splice Strand
CG34217-RA 113..528 17..432 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:51:32 Download gff for BS20595.complete
Subject Subject Range Query Range Percent Splice Strand
2R 8228200..8228615 17..432 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:44:02 Download gff for BS20595.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4115705..4116120 17..432 100   Minus

BS20595.pep Sequence

Translation from 16 to 432

> BS20595.pep
MPGNLFQVLLTVAILPAISLASSSEDGLHHYRASPKLTGPVKLLHDPEDT
ILNTLDGALEKISTIYMQALFAGTHTPELEAPLRALEIELFDLLDELYNQ
NRLKDYIKYEAEVTRQMIIYNMLKRLFGYTQENEAGSV*

BS20595.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:54:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG34217-PA 138 CG34217-PA 1..138 1..138 699 100 Plus