BS20703.complete Sequence
614 bp assembled on 2011-01-18
GenBank Submission: KX802674
> BS20703.complete
GAAGTTATCAGTCGACATGAGCCCAATGAGCGGACTGCGCCAACAGCTAA
AGATGCTGGGTACAGCATTGCTGGGCAAACGGGCCACCAAGTCTGTCAAA
AAGAAACCATTTACGGAGGTGGAAATCAAAGATCTACGCACAGCATTCGA
TCTACTAGACAGAAATCGCGACGGTCGCGTCACCGCCAACGAGCTGCAGT
TTATGCTAAAGAACCTGGGCATAAACGTGAGTGACGAACTCATACACGAT
CTCATACGTGAGGCGAGCCACTCAGGCAATGGCTTAATCAACGAGGCCGA
GTTCCTGCAATGGGTGGGCAGGATCCAGGCGCTGCGGGACGAGCAGCATT
CACATGAGGACAGCAAGGACAGCAAGCCGGTGGACGAGGCCGATGATGTC
ACCGAGGACTTGATAGCCGCATTTAGAGTATTCGATCGGGATGGCAATGG
GTTCATAACGCGCGACGAGCTGCAGACCGCCATGGAGATGATTGGGGAGC
CCTTGAACGAGCAGCAGCTGGAGCAGCTGCTGGTCATCGCGGACTTGGAC
CAGGACGGGCGCATCAATTACGAGGAATTCACGAGACTTTTGCTCTAAAA
GCTTTCTAGACCAT
BS20703.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:05:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip63F-1-RA | 582 | CG15855-PA | 1..582 | 17..598 | 2910 | 100 | Plus |
| Eip63F-1-RC | 546 | CG15855-PC | 1..546 | 53..598 | 2730 | 100 | Plus |
| Eip63F-1-RD | 501 | CG15855-PD | 33..501 | 130..598 | 2345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip63F-1-RA | 1139 | CG15855-RA | 356..937 | 17..598 | 2910 | 100 | Plus |
| Eip63F-1-RC | 880 | CG15855-RC | 133..678 | 53..598 | 2730 | 100 | Plus |
| Eip63F-1-RD | 2777 | CG15855-RD | 390..858 | 130..598 | 2345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3913852..3914005 | 426..273 | 770 | 100 | Minus |
| 3L | 28110227 | 3L | 3913626..3913776 | 575..425 | 755 | 100 | Minus |
| 3L | 28110227 | 3L | 3919883..3920029 | 276..130 | 735 | 100 | Minus |
| 3L | 28110227 | 3L | 3930813..3930854 | 131..90 | 210 | 100 | Minus |
| 3L | 28110227 | 3L | 3930958..3930998 | 91..51 | 205 | 100 | Minus |
| 3L | 28110227 | 3L | 3933247..3933282 | 52..17 | 180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:05:45 has no hits.
BS20703.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:24 Download gff for
BS20703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63F-1-RA | 356..935 | 17..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:41 Download gff for
BS20703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63F-1-RA | 356..935 | 17..596 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:11 Download gff for
BS20703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip63F-1-RA | 356..935 | 17..596 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:11 Download gff for
BS20703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3911894..3911914 | 576..596 | 100 | <- | Minus |
| 3L | 3913626..3913774 | 427..575 | 100 | <- | Minus |
| 3L | 3913852..3914002 | 276..426 | 100 | <- | Minus |
| 3L | 3919884..3920027 | 132..275 | 100 | <- | Minus |
| 3L | 3930813..3930852 | 92..131 | 100 | <- | Minus |
| 3L | 3930958..3930996 | 53..91 | 100 | <- | Minus |
| 3L | 3933247..3933282 | 17..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:41 Download gff for
BS20703.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3911894..3911914 | 576..596 | 100 | <- | Minus |
| arm_3L | 3913626..3913774 | 427..575 | 100 | <- | Minus |
| arm_3L | 3913852..3914002 | 276..426 | 100 | <- | Minus |
| arm_3L | 3919884..3920027 | 132..275 | 100 | <- | Minus |
| arm_3L | 3930813..3930852 | 92..131 | 100 | <- | Minus |
| arm_3L | 3930958..3930996 | 53..91 | 100 | <- | Minus |
| arm_3L | 3933247..3933282 | 17..52 | 100 | | Minus |
BS20703.pep Sequence
Translation from 16 to 597
> BS20703.pep
MSPMSGLRQQLKMLGTALLGKRATKSVKKKPFTEVEIKDLRTAFDLLDRN
RDGRVTANELQFMLKNLGINVSDELIHDLIREASHSGNGLINEAEFLQWV
GRIQALRDEQHSHEDSKDSKPVDEADDVTEDLIAAFRVFDRDGNGFITRD
ELQTAMEMIGEPLNEQQLEQLLVIADLDQDGRINYEEFTRLLL*
BS20703.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip63F-1-PA | 193 | CG15855-PA | 1..193 | 1..193 | 974 | 100 | Plus |
| Eip63F-1-PC | 181 | CG15855-PC | 1..181 | 13..193 | 915 | 100 | Plus |
| Eip63F-1-PD | 166 | CG15855-PD | 9..166 | 36..193 | 796 | 98.1 | Plus |
| Eip63F-1-PB | 161 | CG15855-PB | 6..161 | 38..193 | 785 | 99.4 | Plus |
| Cam-PD | 149 | CG8472-PD | 6..146 | 33..192 | 272 | 35.6 | Plus |
