Clone BS20707 Report

Search the DGRC for BS20707

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:207
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG14277-RA
Protein status:BS20707.pep: gold
Sequenced Size:542

Clone Sequence Records

BS20707.complete Sequence

542 bp assembled on 2011-01-18

GenBank Submission: KX806096

> BS20707.complete
GAAGTTATCAGTCGACATGTTGCGTCTGATTTGCGTGTTCCTGCTCAGCT
GCGTTGGCTTCCAGGCAGCCTTGGCTTGCAATGGCTACAAAGCCAAGCTG
GTCAAGTTGGAGAACTGTGCCGGCGAGGATGCCATTATGACGGTGGGCAG
TGACTTCAGCCTGAAGCTAAACAAGAAGTGTGAACTGGTACCCTCGGGCT
GCATCATGAACAAGCCGTTCAGTACCGCGGTGGCTAAGTTCAAGGTCCAG
AAGGATGGCATCGTAATGAAGGAGGGCAAGATCGATCTATGCGCCGCCAT
TGATCAGGCCTCCTCCGAAGGTAAGGACATGCTAAAGCTTTTCGGAGCAC
CTTCCTCCTGTCCGGTGGGCGAGGAGAAGGTGTGCGCCAACGATCACTCC
GTGGATCTGAGCAAGTACAAGGCCATGTTGGGCATGGCTCGTGGTCACCT
CATCATCGATTCTGAGGTCAAGCATGACACGGGCAAGTCCTGCATTCATG
CCGAAATCGAGATCACCAAGAACTAGAAGCTTTCTAGACCAT

BS20707.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG14277-RB 510 CG14277-PB 1..510 17..526 2550 100 Plus
CG14277-RA 510 CG14277-PA 1..510 17..526 2550 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14277-RB 825 CG14277-RB 182..691 17..526 2550 100 Plus
CG14277-RA 679 CG14277-RA 36..545 17..526 2550 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8242783..8243185 80..482 2015 100 Plus
2L 23513712 2L 8242667..8242729 17..79 315 100 Plus
2L 23513712 2L 8243247..8243292 481..526 230 100 Plus
Blast to na_te.dros performed on 2014-11-26 16:05:50 has no hits.

BS20707.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-20 15:38:24 Download gff for BS20707.complete
Subject Subject Range Query Range Percent Splice Strand
CG14277-RA 14..518 22..526 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:47:44 Download gff for BS20707.complete
Subject Subject Range Query Range Percent Splice Strand
CG14277-RA 41..545 22..526 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:13 Download gff for BS20707.complete
Subject Subject Range Query Range Percent Splice Strand
CG14277-RA 41..545 22..526 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:13 Download gff for BS20707.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8242672..8242729 22..79 100 -> Plus
2L 8242783..8243184 80..481 100 -> Plus
2L 8243248..8243292 482..526 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:47:44 Download gff for BS20707.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8242672..8242729 22..79 100 -> Plus
arm_2L 8242783..8243184 80..481 100 -> Plus
arm_2L 8243248..8243292 482..526 100   Plus

BS20707.pep Sequence

Translation from 16 to 525

> BS20707.pep
MLRLICVFLLSCVGFQAALACNGYKAKLVKLENCAGEDAIMTVGSDFSLK
LNKKCELVPSGCIMNKPFSTAVAKFKVQKDGIVMKEGKIDLCAAIDQASS
EGKDMLKLFGAPSSCPVGEEKVCANDHSVDLSKYKAMLGMARGHLIIDSE
VKHDTGKSCIHAEIEITKN*

BS20707.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:59:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG14277-PB 169 CG14277-PB 1..169 1..169 876 100 Plus
CG14277-PA 169 CG14277-PA 1..169 1..169 876 100 Plus